Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FH041_RS15650 Genome accession   NZ_CP040930
Coordinates   3416680..3417081 (-) Length   133 a.a.
NCBI ID   WP_027914036.1    Uniprot ID   -
Organism   Pseudomonas sp. SWI7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3411680..3422081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FH041_RS15635 (FH041_15635) - 3413645..3415669 (-) 2025 WP_225806697.1 methyl-accepting chemotaxis protein -
  FH041_RS15640 (FH041_15640) - 3415718..3416269 (-) 552 WP_027914034.1 chemotaxis protein CheW -
  FH041_RS15645 (FH041_15645) pilH 3416266..3416631 (-) 366 WP_027914035.1 twitching motility response regulator PilH -
  FH041_RS15650 (FH041_15650) pilG 3416680..3417081 (-) 402 WP_027914036.1 PleD family two-component system response regulator Regulator
  FH041_RS15655 (FH041_15655) gshB 3417321..3418274 (+) 954 WP_027914037.1 glutathione synthase -
  FH041_RS15660 (FH041_15660) - 3418414..3419313 (+) 900 WP_027914038.1 energy transducer TonB -
  FH041_RS15665 (FH041_15665) - 3419360..3419929 (+) 570 WP_027914039.1 YqgE/AlgH family protein -
  FH041_RS15670 (FH041_15670) ruvX 3419929..3420366 (+) 438 WP_028687253.1 Holliday junction resolvase RuvX -
  FH041_RS15675 (FH041_15675) pyrR 3420416..3420934 (+) 519 WP_023533003.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  FH041_RS15680 (FH041_15680) - 3420947..3421951 (+) 1005 WP_027914040.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14603.87 Da        Isoelectric Point: 5.1550

>NTDB_id=368376 FH041_RS15650 WP_027914036.1 3416680..3417081(-) (pilG) [Pseudomonas sp. SWI7]
MEQPLKVMVIDDSRTIRRTAQMLLSEVGCEVITASDGFDALAKIVDHNPAVIFVDVLMPRLDGYQTCAVIKQNSTFKDVP
VILLSSRDGLFDKARGRVVGSDQFLTKPFTKEELIEAIQAHVPGFATAQQTAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=368376 FH041_RS15650 WP_027914036.1 3416680..3417081(-) (pilG) [Pseudomonas sp. SWI7]
ATGGAACAACCCCTGAAAGTGATGGTGATCGACGATTCACGCACCATTCGCCGCACGGCGCAGATGCTGCTCAGTGAGGT
GGGCTGCGAGGTCATCACTGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGATCACAACCCGGCCGTGATCTTCG
TCGATGTCTTGATGCCGCGCCTGGACGGCTACCAGACGTGCGCGGTGATCAAGCAGAACAGCACCTTCAAGGACGTCCCG
GTGATTCTGTTGTCGTCGCGCGACGGTTTGTTCGACAAGGCCCGCGGGCGTGTGGTCGGTTCTGATCAGTTTCTGACCAA
GCCGTTTACCAAGGAAGAACTGATCGAGGCAATACAGGCCCATGTGCCTGGGTTTGCCACAGCCCAACAAACAGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.5

90.226

0.609

Multiple sequence alignment