Detailed information NTG0368076

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GZS11_RS00855
• Genome accession: NZ_CP048344
• Coordinates: 181622..182605 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 124
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 176622..187605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GZS11_RS00840 (GZS11_00840)	dppA	177765..179372 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
GZS11_RS00845 (GZS11_00845)	dppB	179680..180699 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GZS11_RS00850 (GZS11_00850)	dppC	180709..181611 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GZS11_RS00855 (GZS11_00855)	amiE	181622..182605 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GZS11_RS00860 (GZS11_00860)	dppF	182602..183606 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GZS11_RS00865 (GZS11_00865)	yhjV	183636..184907 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
GZS11_RS00870 (GZS11_00870)	-	185383..185490 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GZS11_RS00875 (GZS11_00875)	-	185866..185973 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GZS11_RS23805	-	186349..186456 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GZS11_RS00885 (GZS11_00885)	-	186832..186939 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=368076 GZS11_RS00855 WP_001196486.1 181622..182605(+) (amiE) [Escherichia coli strain 124]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=368076 GZS11_RS00855 WP_001196486.1 181622..182605(+) (amiE) [Escherichia coli strain 124]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404