Detailed information NTG0036806

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: SAA6159_RS03730
• Genome accession: NC_017338
• Coordinates: 792661..793743 (+)
• Length: 360 a.a.
• NCBI ID: WP_044025869.1
• Uniprot ID: -
• Organism: Staphylococcus aureus subsp. aureus JKD6159
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 787661..798743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAA6159_RS03710 (SAA6159_00701)	-	788031..789101 (-)	1071	WP_000460983.1	GGDEF domain-containing protein	-
SAA6159_RS03715 (SAA6159_00702)	-	789419..790474 (+)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
SAA6159_RS03720 (SAA6159_00703)	-	790646..791287 (-)	642	WP_000192945.1	YigZ family protein	-
SAA6159_RS03725 (SAA6159_00704)	fakB1	791431..792297 (+)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
SAA6159_RS03730 (SAA6159_00705)	comFA	792661..793743 (+)	1083	WP_044025869.1	DEAD/DEAH box helicase	Machinery gene
SAA6159_RS03735 (SAA6159_00706)	-	793736..794410 (+)	675	WP_001057963.1	ComF family protein	-
SAA6159_RS03740 (SAA6159_00707)	hpf	794471..795043 (+)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
SAA6159_RS03745 (SAA6159_00708)	secA	795457..797988 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
SAA6159_RS03750 (SAA6159_02925)	-	798030..798146 (+)	117	WP_044025870.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42048.67 Da
• Isoelectric Point: 9.8271

>NTDB_id=36806 SAA6159_RS03730 WP_044025869.1 792661..793743(+) (comFA) [Staphylococcus aureus subsp. aureus JKD6159]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEICKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VKHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINKQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=36806 SAA6159_RS03730 WP_044025869.1 792661..793743(+) (comFA) [Staphylococcus aureus subsp. aureus JKD6159]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGGGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTTGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTAAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAAACAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGACGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACAGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (214-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367