Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SAA6159_RS03645 Genome accession   NC_017338
Coordinates   776133..777104 (+) Length   323 a.a.
NCBI ID   WP_014532744.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus JKD6159     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 771133..782104
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAA6159_RS03625 (SAA6159_00685) nrdI 771824..772222 (+) 399 WP_000692521.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  SAA6159_RS03630 (SAA6159_00686) nrdE 772185..774290 (+) 2106 WP_000855505.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  SAA6159_RS03635 (SAA6159_00687) nrdF 774408..775379 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  SAA6159_RS03640 (SAA6159_02915) - 775939..776094 (+) 156 WP_031901244.1 hypothetical protein -
  SAA6159_RS03645 (SAA6159_00689) ceuB 776133..777104 (+) 972 WP_014532744.1 ABC transporter permease Machinery gene
  SAA6159_RS03650 (SAA6159_00690) - 777091..778047 (+) 957 WP_001245583.1 iron chelate uptake ABC transporter family permease subunit -
  SAA6159_RS03655 (SAA6159_00691) - 778044..778805 (+) 762 WP_000616867.1 ABC transporter ATP-binding protein -
  SAA6159_RS03660 (SAA6159_00692) - 778924..779952 (+) 1029 WP_000754450.1 siderophore ABC transporter substrate-binding protein -
  SAA6159_RS03665 (SAA6159_02920) - 780213..780527 (-) 315 WP_001127269.1 CHY zinc finger protein -
  SAA6159_RS03670 (SAA6159_00693) murB 780545..781468 (-) 924 WP_000608439.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35600.16 Da        Isoelectric Point: 10.1194

>NTDB_id=36805 SAA6159_RS03645 WP_014532744.1 776133..777104(+) (ceuB) [Staphylococcus aureus subsp. aureus JKD6159]
MKYLLKGNILLLLLMLLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=36805 SAA6159_RS03645 WP_014532744.1 776133..777104(+) (ceuB) [Staphylococcus aureus subsp. aureus JKD6159]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATGTTGTTGACAATTATTTCGTTGTTCATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAGTCACAGCGGAATATTTTATTCTCAAGCCGAATACCAAGGACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGTAGTATTTGCGGTACGTTTTTATTTGTTAAAATCATTGATTTTATAAAAGTGA
AAGATGTCATTTTTGTACCGCTTCTAGGAATTATGATGGGTGGGATTGTTGCAAGTTTCACAACCTTCATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAATTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCTAATCATTTCACGATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTACGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTGGTAGTGGTG
ACTGTTGGAACATTACCGTTCTTAGGTTTAGTTATTCCAAATATTATTTCGATTTATAGAGGTGATCATTTGAAAAATGC
TATCCCACATACGATGATGTTAGGTGCCATCTTTGTATTATTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471