Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SAA6159_RS03265 Genome accession   NC_017338
Coordinates   696963..697637 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus subsp. aureus JKD6159     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 691963..702637
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAA6159_RS03240 (SAA6159_00608) - 692180..693247 (+) 1068 WP_000980139.1 membrane protein -
  SAA6159_RS03245 (SAA6159_00609) - 693398..694441 (+) 1044 WP_001030773.1 alpha/beta hydrolase -
  SAA6159_RS03250 (SAA6159_00610) - 694770..695198 (+) 429 WP_000198500.1 hypothetical protein -
  SAA6159_RS03255 (SAA6159_00611) - 695405..695911 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  SAA6159_RS03260 (SAA6159_00612) graX 696024..696947 (+) 924 WP_000802957.1 auxiliary protein GraX/ApsX -
  SAA6159_RS03265 (SAA6159_00613) braR 696963..697637 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  SAA6159_RS03270 (SAA6159_00614) graS 697630..698670 (+) 1041 WP_001061246.1 histidine kinase GraS/ApsS -
  SAA6159_RS03275 (SAA6159_00615) vraF 698814..699575 (+) 762 WP_000985998.1 ABC transporter ATP-binding protein VraF -
  SAA6159_RS03280 (SAA6159_00616) vraG 699565..701454 (+) 1890 WP_000143605.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=36802 SAA6159_RS03265 WP_001166496.1 696963..697637(+) (braR) [Staphylococcus aureus subsp. aureus JKD6159]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=36802 SAA6159_RS03265 WP_001166496.1 696963..697637(+) (braR) [Staphylococcus aureus subsp. aureus JKD6159]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397

Multiple sequence alignment