Detailed information NTG0367996

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GZS12_RS00965
• Genome accession: NZ_CP048337
• Coordinates: 222050..223033 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196481.1
• Uniprot ID: -
• Organism: Escherichia coli strain 142
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 217050..228033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GZS12_RS00950 (GZS12_00950)	dppA	218350..219957 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
GZS12_RS00955 (GZS12_00955)	dppB	220108..221127 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GZS12_RS00960 (GZS12_00960)	dppC	221137..222039 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GZS12_RS00965 (GZS12_00965)	amiE	222050..223033 (+)	984	WP_001196481.1	dipeptide ABC transporter ATP-binding protein	Regulator
GZS12_RS00970 (GZS12_00970)	dppF	223030..224034 (+)	1005	WP_000107033.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GZS12_RS00975 (GZS12_00975)	yhjV	224064..225335 (-)	1272	WP_022646242.1	aromatic amino acid transport family protein	-
GZS12_RS00980 (GZS12_00980)	-	225811..225918 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
GZS12_RS00985 (GZS12_00985)	-	226293..226400 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
GZS12_RS26030	-	226777..226884 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
GZS12_RS00995 (GZS12_00995)	-	227261..227368 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35798.31 Da
• Isoelectric Point: 6.5813

>NTDB_id=367996 GZS12_RS00965 WP_001196481.1 222050..223033(+) (amiE) [Escherichia coli strain 142]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAIAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=367996 GZS12_RS00965 WP_001196481.1 222050..223033(+) (amiE) [Escherichia coli strain 142]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATAGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407