Detailed information NTG0367970

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: FHJ82_RS17655
• Genome accession: NZ_CP040881
• Coordinates: 3581633..3582778 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus sp. HNA3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3576633..3587778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FHJ82_RS17635 (FHJ82_17830)	-	3577530..3577958 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
FHJ82_RS17640 (FHJ82_17835)	-	3578112..3578624 (+)	513	Protein_3432	bacteriocin biosynthesis protein AlbG	-
FHJ82_RS17645 (FHJ82_17840)	-	3578631..3580007 (-)	1377	WP_032875890.1	YncE family protein	-
FHJ82_RS17650 (FHJ82_17845)	-	3580047..3581402 (-)	1356	WP_032875887.1	YncE family protein	-
FHJ82_RS17655 (FHJ82_17855)	rapF	3581633..3582778 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
FHJ82_RS17660 (FHJ82_17860)	-	3582762..3582881 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
FHJ82_RS17665 (FHJ82_17865)	speB	3583004..3583876 (-)	873	WP_032875884.1	agmatinase	-
FHJ82_RS17670 (FHJ82_17870)	speE	3583935..3584764 (-)	830	Protein_3438	spermidine synthase	-
FHJ82_RS17675 (FHJ82_17875)	-	3584963..3587035 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
FHJ82_RS17680 (FHJ82_17880)	-	3587060..3587493 (-)	434	Protein_3440	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=367970 FHJ82_RS17655 WP_074534220.1 3581633..3582778(+) (rapF) [Bacillus sp. HNA3]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=367970 FHJ82_RS17655 WP_074534220.1 3581633..3582778(+) (rapF) [Bacillus sp. HNA3]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541