Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SAA6159_RS01720 Genome accession   NC_017338
Coordinates   389743..390588 (+) Length   281 a.a.
NCBI ID   WP_044025861.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus JKD6159     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 384743..395588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAA6159_RS01705 (SAA6159_00331) - 385012..386853 (-) 1842 WP_000077331.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  SAA6159_RS01710 (SAA6159_00332) metC 386822..387982 (-) 1161 WP_000175839.1 cystathionine beta-lyase MetC -
  SAA6159_RS01715 (SAA6159_00333) - 387979..389082 (-) 1104 WP_000655700.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  SAA6159_RS01720 (SAA6159_00334) spo0J 389743..390588 (+) 846 WP_044025861.1 ParB/RepB/Spo0J family partition protein Regulator
  SAA6159_RS01725 (SAA6159_00335) - 390745..391626 (+) 882 WP_001077599.1 mechanosensitive ion channel family protein -
  SAA6159_RS01730 (SAA6159_00336) - 391656..391859 (+) 204 WP_000157345.1 DUF951 domain-containing protein -
  SAA6159_RS01735 (SAA6159_00337) ychF 391871..392968 (+) 1098 WP_001218734.1 redox-regulated ATPase YchF -
  SAA6159_RS01740 (SAA6159_00338) - 393054..393245 (-) 192 WP_001052484.1 hypothetical protein -
  SAA6159_RS01745 (SAA6159_00339) rpsF 393489..393785 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  SAA6159_RS01750 (SAA6159_00340) ssbA 393806..394309 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  SAA6159_RS01755 (SAA6159_00341) rpsR 394361..394603 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32870.87 Da        Isoelectric Point: 10.0091

>NTDB_id=36794 SAA6159_RS01720 WP_044025861.1 389743..390588(+) (spo0J) [Staphylococcus aureus subsp. aureus JKD6159]
MSELSKSEDQRITKTKDEQIKQIDISDIKQNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAVIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQEDFLRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=36794 SAA6159_RS01720 WP_044025861.1 389743..390588(+) (spo0J) [Staphylococcus aureus subsp. aureus JKD6159]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACAGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAACAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTTTAAAATATGTATCAGCGGTTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAATCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGAAGA
TTTTCTAAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.613

92.883

0.377

Multiple sequence alignment