Detailed information NTG0367896

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: FHP15_RS27345
• Genome accession: NZ_CP040880
• Coordinates: 4946358..4947707 (-)
• Length: 449 a.a.
• NCBI ID: WP_000900493.1
• Uniprot ID: -
• Organism: Bacillus paranthracis strain F3351/87
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4941358..4952707

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FHP15_RS27325 (FHP15_27355)	secA	4941684..4944191 (-)	2508	WP_000579382.1	preprotein translocase subunit SecA	-
FHP15_RS27330 (FHP15_27360)	raiA	4944467..4945009 (-)	543	WP_000671191.1	ribosome-associated translation inhibitor RaiA	-
FHP15_RS27335 (FHP15_27365)	cspC	4945330..4945527 (-)	198	WP_001162041.1	cold shock protein CspC	-
FHP15_RS27340 (FHP15_27370)	-	4945654..4946358 (-)	705	WP_002028884.1	ComF family protein	-
FHP15_RS27345 (FHP15_27375)	comFA	4946358..4947707 (-)	1350	WP_000900493.1	ATP-dependent helicase ComFA	Machinery gene
FHP15_RS27350 (FHP15_27380)	-	4947834..4949291 (-)	1458	WP_000499503.1	C40 family peptidase	-
FHP15_RS27355 (FHP15_27385)	-	4949439..4949753 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
FHP15_RS27360 (FHP15_27390)	-	4949927..4950769 (-)	843	WP_000844764.1	DegV family protein	-
FHP15_RS27365 (FHP15_27395)	-	4951009..4951644 (+)	636	WP_000926695.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51011.49 Da
• Isoelectric Point: 9.7406

>NTDB_id=367896 FHP15_RS27345 WP_000900493.1 4946358..4947707(-) (comFA) [Bacillus paranthracis strain F3351/87]
MLGGKQLLLEELSSDLRRELSDLKKRGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECAVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRKGKQKGVIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=367896 FHP15_RS27345 WP_000900493.1 4946358..4947707(-) (comFA) [Bacillus paranthracis strain F3351/87]
ATGCTTGGTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAGGGG
AGAGGTTGTATGTGTACAAGGTATAACGAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGCGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAATGGAAGCGTAATTTCAGAAAGGGGAAACAAAA
AGGTGTTATTGTGTCAGGACGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (110-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361