Detailed information NTG0367672

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GZS16_RS01115
• Genome accession: NZ_CP048310
• Coordinates: 235445..236428 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 32-4
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 230445..241428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GZS16_RS01100 (GZS16_01100)	dppA	231588..233195 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
GZS16_RS25845	-	233229..233339 (-)	111	Protein_224	hypothetical protein	-
GZS16_RS01105 (GZS16_01105)	dppB	233503..234522 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GZS16_RS01110 (GZS16_01110)	dppC	234532..235434 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GZS16_RS01115 (GZS16_01115)	amiE	235445..236428 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GZS16_RS01120 (GZS16_01120)	dppF	236425..237429 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GZS16_RS01125 (GZS16_01125)	yhjV	237459..238730 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
GZS16_RS01130 (GZS16_01130)	ldrD	239206..239313 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
GZS16_RS01135 (GZS16_01135)	bcsG	239400..241079 (-)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
GZS16_RS01140 (GZS16_01140)	bcsF	241076..241267 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=367672 GZS16_RS01115 WP_001196486.1 235445..236428(+) (amiE) [Escherichia coli strain 32-4]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=367672 GZS16_RS01115 WP_001196486.1 235445..236428(+) (amiE) [Escherichia coli strain 32-4]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404