Detailed information NTG0036762

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NHAL_RS10715
• Genome accession: NC_013960
• Coordinates: 2279439..2280509 (-)
• Length: 356 a.a.
• NCBI ID: WP_013033156.1
• Uniprot ID: -
• Organism: Nitrosococcus halophilus Nc 4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2274439..2285509

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NHAL_RS10690 (Nhal_2198)	-	2274646..2275881 (+)	1236	WP_013033153.1	VanZ family protein	-
NHAL_RS22250	-	2276253..2276567 (+)	315	WP_041354885.1	sulfotransferase	-
NHAL_RS21995 (Nhal_2199)	-	2276561..2277160 (+)	600	WP_083761394.1	sulfotransferase	-
NHAL_RS10705 (Nhal_2200)	-	2277420..2278139 (+)	720	WP_083761443.1	S1 family peptidase	-
NHAL_RS10710 (Nhal_2201)	rpoH	2278170..2279033 (-)	864	WP_013033155.1	RNA polymerase sigma factor RpoH	-
NHAL_RS10715 (Nhal_2202)	pilA	2279439..2280509 (-)	1071	WP_013033156.1	signal recognition particle-docking protein FtsY	Machinery gene
NHAL_RS10720 (Nhal_2203)	-	2280590..2281969 (+)	1380	WP_013033157.1	M16 family metallopeptidase	-
NHAL_RS10725 (Nhal_2204)	-	2281959..2283263 (+)	1305	WP_013033158.1	M16 family metallopeptidase	-
NHAL_RS10730 (Nhal_2205)	rsmD	2283247..2283825 (+)	579	WP_013033159.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NHAL_RS10735 (Nhal_2206)	coaD	2283853..2284335 (+)	483	WP_013033160.1	pantetheine-phosphate adenylyltransferase	-
NHAL_RS10740 (Nhal_2207)	-	2284373..2284627 (+)	255	WP_013033161.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 38380.21 Da
• Isoelectric Point: 5.8384

>NTDB_id=36762 NHAL_RS10715 WP_013033156.1 2279439..2280509(-) (pilA) [Nitrosococcus halophilus Nc 4]
MVSFFKRKGKSPEQNPETVTSPPEMAETPEEANGGTETVKKQRLFKRLRNRLGRTRGNLTGGIADLMLGKKNIDDELLEE
IETQLLVADVGVEATQSIIDNLTVRVSRKQLKDPAALMAALRENMQELLLPSSHPLVIPEGIKPFVILMVGVNGVGKTTT
IGKLAKKFQAEGRSVMLAAGDTFRAAAVEQLQAWGERNQVPVIAQRSGADSASVIFDALQSAQARGIDVLIADTAGRLHT
QANLMEELKKVKRVMGKVDPQAPHEIMLTVDAGTGQNALNQAKQFHEAVGLTGITLTKLDGTAKGGVIFAIAKKMALPIR
FIGVGEGIDDLRPFDAEEFVAALLTPTSAEEMEEEA

Nucleotide

• Length: 1071 bp

>NTDB_id=36762 NHAL_RS10715 WP_013033156.1 2279439..2280509(-) (pilA) [Nitrosococcus halophilus Nc 4]
ATGGTAAGTTTCTTTAAGCGAAAGGGAAAGAGCCCAGAACAAAATCCAGAAACGGTGACTTCTCCCCCTGAAATGGCTGA
AACCCCGGAGGAAGCCAATGGGGGCACGGAAACCGTGAAAAAGCAGCGGTTGTTTAAACGCCTGCGTAATCGCCTGGGTC
GCACCCGCGGCAACTTGACCGGCGGCATCGCCGACTTGATGCTGGGTAAAAAAAACATCGATGATGAATTACTGGAAGAG
ATTGAAACTCAACTGCTTGTTGCCGATGTAGGGGTAGAAGCCACCCAATCCATCATCGATAATCTCACCGTGCGAGTCTC
CCGCAAACAACTCAAAGATCCGGCCGCCTTAATGGCCGCCTTACGGGAGAATATGCAAGAACTGCTGCTGCCCTCTAGCC
ACCCCCTCGTGATTCCCGAGGGCATCAAACCCTTCGTCATTCTCATGGTGGGCGTCAATGGAGTCGGCAAAACCACCACG
ATCGGTAAGTTGGCCAAAAAATTCCAGGCGGAAGGCCGCTCGGTAATGCTGGCTGCAGGCGATACCTTCCGCGCTGCCGC
GGTGGAGCAGCTTCAAGCCTGGGGCGAACGTAACCAGGTGCCTGTGATCGCCCAGCGCAGCGGGGCTGATTCTGCCTCGG
TGATTTTTGATGCCCTACAATCGGCCCAGGCGCGAGGAATCGATGTACTGATTGCGGATACTGCAGGCCGCCTGCATACC
CAGGCCAATCTCATGGAAGAACTCAAAAAAGTCAAACGGGTCATGGGGAAAGTGGATCCCCAGGCTCCCCATGAAATAAT
GCTGACCGTAGATGCCGGGACGGGCCAAAATGCCCTCAATCAGGCTAAACAGTTCCATGAAGCCGTGGGCCTTACAGGGA
TTACCCTCACCAAGTTGGATGGCACCGCTAAGGGGGGAGTCATTTTCGCCATTGCCAAGAAAATGGCGCTCCCTATCCGC
TTTATCGGCGTTGGTGAAGGAATCGACGACCTCCGTCCTTTCGACGCGGAAGAGTTCGTGGCGGCCTTACTTACCCCTAC
CTCCGCGGAAGAGATGGAGGAAGAAGCTTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (144-344)

• SRP54-type protein, helical bundle domain (SRP54_N) (59-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.224	94.101	0.52