Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | KPZ59_RS16190 | Genome accession | NZ_CP048131 |
| Coordinates | 3410382..3410897 (+) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain D46 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3405382..3415897
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KPZ59_RS16170 (KPZ59_03246) | - | 3405744..3407204 (+) | 1461 | WP_000004971.1 | amino acid permease | - |
| KPZ59_RS16175 (KPZ59_03247) | - | 3407481..3408686 (+) | 1206 | WP_000512698.1 | RtcB family protein | - |
| KPZ59_RS16180 (KPZ59_03248) | - | 3408705..3408848 (+) | 144 | WP_162138624.1 | hypothetical protein | - |
| KPZ59_RS16185 (KPZ59_03249) | omp38 | 3408973..3410001 (-) | 1029 | WP_000777889.1 | outer membrane protein Omp38 | - |
| KPZ59_RS16190 (KPZ59_03250) | fimT | 3410382..3410897 (+) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| KPZ59_RS16195 (KPZ59_03251) | - | 3411006..3412181 (+) | 1176 | WP_000129969.1 | thiolase family protein | - |
| KPZ59_RS16200 (KPZ59_03252) | - | 3412308..3412751 (+) | 444 | WP_001176580.1 | VOC family protein | - |
| KPZ59_RS16205 (KPZ59_03253) | - | 3412794..3413147 (-) | 354 | WP_000457779.1 | DMT family transporter | - |
| KPZ59_RS16210 (KPZ59_03254) | - | 3413229..3413714 (-) | 486 | WP_000935248.1 | DUF934 domain-containing protein | - |
| KPZ59_RS16215 (KPZ59_03255) | - | 3413707..3415350 (-) | 1644 | WP_000281766.1 | nitrite/sulfite reductase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=367353 KPZ59_RS16190 WP_000477151.1 3410382..3410897(+) (fimT) [Acinetobacter baumannii strain D46]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=367353 KPZ59_RS16190 WP_000477151.1 3410382..3410897(+) (fimT) [Acinetobacter baumannii strain D46]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |