Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FHI56_RS04075 Genome accession   NZ_CP040804
Coordinates   583117..583848 (+) Length   243 a.a.
NCBI ID   WP_149561190.1    Uniprot ID   -
Organism   Streptococcus salivarius strain LAB813     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 578117..588848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHI56_RS04050 (FHI56_04050) - 578122..580227 (+) 2106 WP_049529235.1 AAA family ATPase -
  FHI56_RS11860 - 580663..580788 (+) 126 WP_002884447.1 hypothetical protein -
  FHI56_RS04055 (FHI56_04055) - 580806..581414 (+) 609 WP_002884297.1 DUF4230 domain-containing protein -
  FHI56_RS11645 - 581989..582156 (+) 168 WP_014634940.1 hypothetical protein -
  FHI56_RS04065 (FHI56_04065) - 582337..582636 (-) 300 WP_014634939.1 hypothetical protein -
  FHI56_RS04070 (FHI56_04070) - 582633..583052 (-) 420 WP_037599159.1 HIT family protein -
  FHI56_RS04075 (FHI56_04075) pptA 583117..583848 (+) 732 WP_149561190.1 ABC transporter ATP-binding protein Regulator
  FHI56_RS04080 (FHI56_04080) pptB 583848..584882 (+) 1035 WP_392396793.1 ABC transporter permease Regulator
  FHI56_RS04085 (FHI56_04085) ccrZ 584940..585731 (+) 792 WP_002884270.1 cell cycle regulator CcrZ -
  FHI56_RS04090 (FHI56_04090) trmB 585741..586382 (+) 642 WP_003096317.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FHI56_RS04100 (FHI56_04100) - 586599..587780 (-) 1182 WP_049528392.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26767.07 Da        Isoelectric Point: 4.4799

>NTDB_id=367342 FHI56_RS04075 WP_149561190.1 583117..583848(+) (pptA) [Streptococcus salivarius strain LAB813]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDSASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVGPSLLIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQIFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=367342 FHI56_RS04075 WP_149561190.1 583117..583848(+) (pptA) [Streptococcus salivarius strain LAB813]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACCTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGAAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACCATTCAGCAAGATTCAGCTAGCTATCGTCAGAAGATTGGTTACATCCCT
GAAACCCCAAGCCTCTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTTGGTCCAAGTCTTCTCATTGTTGATGAGCCCTTC
CTAGGTTTGGATCCCTTGGCGATTTCGGACTTGATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGCAAGGCAATTCTCAT
GTCTACACACGTTTTGGATTCGGCTGAGAAAATGTGTGACCGTTTTGTCATCTTACATCACGGTCAAGTCTTAGCACAGG
GGACTCTCGAGGAGCTCCGTCAGATTTTTGGCGACGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

97.942

100

0.979
  pptA Streptococcus thermophilus LMD-9

95.885

100

0.959

Multiple sequence alignment