Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FG899_RS03395 | Genome accession | NZ_CP040799 |
| Coordinates | 782584..783078 (+) | Length | 164 a.a. |
| NCBI ID | WP_004089231.1 | Uniprot ID | Q87DQ5 |
| Organism | Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
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Genomic Context
Location: 777584..788078
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FG899_RS03380 (FG899_03560) | cyoB | 777913..779910 (-) | 1998 | WP_004083794.1 | cytochrome o ubiquinol oxidase subunit I | - |
| FG899_RS03385 (FG899_03565) | cyoA | 779904..780863 (-) | 960 | WP_011097726.1 | ubiquinol oxidase subunit II | - |
| FG899_RS03390 (FG899_03570) | - | 781332..782333 (-) | 1002 | WP_004083792.1 | polyprenyl synthetase family protein | - |
| FG899_RS03395 (FG899_03575) | ssb | 782584..783078 (+) | 495 | WP_004089231.1 | single-stranded DNA-binding protein | Machinery gene |
| FG899_RS03400 (FG899_12185) | - | 783354..783518 (+) | 165 | WP_014607674.1 | hypothetical protein | - |
| FG899_RS03405 (FG899_03580) | - | 784727..785638 (+) | 912 | WP_004089229.1 | class I SAM-dependent methyltransferase | - |
| FG899_RS03410 (FG899_03585) | - | 785951..787147 (+) | 1197 | WP_024749296.1 | cation:proton antiporter | - |
| FG899_RS03415 (FG899_03590) | gloA | 787308..787835 (-) | 528 | WP_004089226.1 | lactoylglutathione lyase | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 18227.20 Da Isoelectric Point: 5.9527
>NTDB_id=367263 FG899_RS03395 WP_004089231.1 782584..783078(+) (ssb) [Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1]
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQTRQPSQSPQSSPPPMDDFADD
DIPF
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQTRQPSQSPQSSPPPMDDFADD
DIPF
Nucleotide
Download Length: 495 bp
>NTDB_id=367263 FG899_RS03395 WP_004089231.1 782584..783078(+) (ssb) [Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1]
ATGGCCCGTGGTATCAATAAAGTCATCCTCGTCGGTAATCTCGGTAACGATCCGGATATCAAATACACCCAAGGTGGTAT
GACGATCACTACCATCAGCTTGGCGACAACCAGTGTTCGTAAGGACAAGGATGGCAATACCCAGGAGCGGACCGAATGGC
ACAGGGTCAAGTTTTTCGGAAAACTCGGTGAGATTGCCGGGGAATATCTACGTAAGGGATCACAGTGCTATATCGAAGGG
AGCATTCGCTATGACAAGTTCACTGGCCAGGATGGCCAAGAGCGCTATGTTACAGAGATTGTTGCTGATGAGATGCAAAT
GTTGGGTGGCCGTAGTGATGGTGGCGGTATGGGCGGGGGCGGTGAGCGCCCACAGCGTCAAACATCGCAGCGTCAGGATT
ACGCCCCACGTCGCCAGACCCGTCAGCCGTCACAGTCGCCGCAATCTTCACCGCCGCCGATGGACGATTTCGCTGATGAC
GATATTCCTTTCTAA
ATGGCCCGTGGTATCAATAAAGTCATCCTCGTCGGTAATCTCGGTAACGATCCGGATATCAAATACACCCAAGGTGGTAT
GACGATCACTACCATCAGCTTGGCGACAACCAGTGTTCGTAAGGACAAGGATGGCAATACCCAGGAGCGGACCGAATGGC
ACAGGGTCAAGTTTTTCGGAAAACTCGGTGAGATTGCCGGGGAATATCTACGTAAGGGATCACAGTGCTATATCGAAGGG
AGCATTCGCTATGACAAGTTCACTGGCCAGGATGGCCAAGAGCGCTATGTTACAGAGATTGTTGCTGATGAGATGCAAAT
GTTGGGTGGCCGTAGTGATGGTGGCGGTATGGGCGGGGGCGGTGAGCGCCCACAGCGTCAAACATCGCAGCGTCAGGATT
ACGCCCCACGTCGCCAGACCCGTCAGCCGTCACAGTCGCCGCAATCTTCACCGCCGCCGATGGACGATTTCGCTGATGAC
GATATTCCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
49.153 |
100 |
0.53 |
| ssb | Glaesserella parasuis strain SC1401 |
46.927 |
100 |
0.512 |
| ssb | Neisseria meningitidis MC58 |
41.618 |
100 |
0.439 |
| ssb | Neisseria gonorrhoeae MS11 |
41.04 |
100 |
0.433 |