Detailed information NTG0367207

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: GWK05_RS23510
• Genome accession: NZ_CP048107
• Coordinates: 4929154..4930179 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 201609
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4924154..4935179

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GWK05_RS23500 (GWK05_23465)	rpmE	4926385..4926597 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
GWK05_RS23505 (GWK05_23470)	priA	4926800..4928998 (+)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
GWK05_RS23510 (GWK05_23475)	cytR	4929154..4930179 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
GWK05_RS23515 (GWK05_23480)	ftsN	4930271..4931230 (+)	960	WP_000068834.1	cell division protein FtsN	-
GWK05_RS23520 (GWK05_23485)	hslV	4931323..4931853 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
GWK05_RS23525 (GWK05_23490)	hslU	4931863..4933194 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
GWK05_RS23530 (GWK05_23495)	menA	4933261..4934187 (+)	927	WP_096940168.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
GWK05_RS23535 (GWK05_23500)	rraA	4934280..4934765 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
GWK05_RS23540 (GWK05_23505)	zapB	4934850..4935095 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=367207 GWK05_RS23510 WP_000644904.1 4929154..4930179(+) (cytR) [Escherichia coli strain 201609]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=367207 GWK05_RS23510 WP_000644904.1 4929154..4930179(+) (cytR) [Escherichia coli strain 201609]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628