Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   FHE73_RS21760 Genome accession   NZ_CP040782
Coordinates   4216142..4216936 (-) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus thuringiensis strain HM-311     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4211142..4221936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHE73_RS21735 (FHE73_21735) - 4211676..4213748 (-) 2073 WP_089148290.1 sigma-54-dependent Fis family transcriptional regulator -
  FHE73_RS21740 (FHE73_21740) - 4213885..4214118 (+) 234 WP_001190210.1 DUF2627 domain-containing protein -
  FHE73_RS21745 (FHE73_21745) - 4214168..4214896 (-) 729 WP_000172585.1 glycerophosphodiester phosphodiesterase -
  FHE73_RS21750 (FHE73_21750) - 4214947..4215093 (+) 147 WP_000803575.1 YycC family protein -
  FHE73_RS21755 (FHE73_21755) - 4215334..4215889 (-) 556 Protein_4204 PRK06770 family protein -
  FHE73_RS21760 (FHE73_21760) spo0A 4216142..4216936 (-) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  FHE73_RS21770 (FHE73_21770) spoIVB 4217227..4218525 (-) 1299 WP_002164177.1 SpoIVB peptidase -
  FHE73_RS21775 (FHE73_21775) recN 4218644..4220383 (-) 1740 WP_000947761.1 DNA repair protein RecN Machinery gene
  FHE73_RS21780 (FHE73_21780) argR 4220648..4221097 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=367141 FHE73_RS21760 WP_011110369.1 4216142..4216936(-) (spo0A) [Bacillus thuringiensis strain HM-311]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=367141 FHE73_RS21760 WP_011110369.1 4216142..4216936(-) (spo0A) [Bacillus thuringiensis strain HM-311]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGACGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACGGCATTCGGGCAAGAAGATGTGACGAAAAAAGCTGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCGATTTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACGACAGCGAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCGTGGAGCCGTGGGAATATTGATTCTATATCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAAGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment