Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   SAOV_RS03560 Genome accession   NC_017337
Coordinates   719324..719998 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus subsp. aureus ED133     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 714324..724998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOV_RS03530 (SAOV_0688) - 714540..715607 (+) 1068 WP_000980142.1 membrane protein -
  SAOV_RS03535 (SAOV_0689) - 715758..716801 (+) 1044 WP_001030765.1 alpha/beta hydrolase -
  SAOV_RS03545 (SAOV_0690) - 717131..717559 (+) 429 WP_000198501.1 hypothetical protein -
  SAOV_RS03550 (SAOV_0691c) - 717766..718272 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  SAOV_RS03555 (SAOV_0692) graX 718385..719308 (+) 924 WP_000802957.1 auxiliary protein GraX/ApsX -
  SAOV_RS03560 (SAOV_0693) braR 719324..719998 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  SAOV_RS03565 (SAOV_0694) graS 719991..721031 (+) 1041 WP_001061265.1 histidine kinase GraS/ApsS -
  SAOV_RS03570 (SAOV_0695) vraF 721175..721936 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  SAOV_RS03575 (SAOV_0696) vraG 721926..723815 (+) 1890 WP_000143606.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=36711 SAOV_RS03560 WP_001166496.1 719324..719998(+) (braR) [Staphylococcus aureus subsp. aureus ED133]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=36711 SAOV_RS03560 WP_001166496.1 719324..719998(+) (braR) [Staphylococcus aureus subsp. aureus ED133]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATACTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397


Multiple sequence alignment