Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FED49_RS05900 Genome accession   NZ_CP040747
Coordinates   1136068..1136265 (+) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain HQ-51-Ba     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1131068..1141265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FED49_RS05870 - 1131468..1131647 (+) 180 WP_008348517.1 YjzC family protein -
  FED49_RS05875 - 1131817..1133082 (+) 1266 WP_007499050.1 MFS transporter -
  FED49_RS05880 - 1133202..1133396 (-) 195 WP_008348514.1 YjzD family protein -
  FED49_RS05885 - 1133609..1134349 (+) 741 WP_007499048.1 hypothetical protein -
  FED49_RS05890 - 1134425..1135000 (+) 576 WP_138825540.1 nad binding enzyme -
  FED49_RS05895 med 1135091..1136056 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  FED49_RS05900 comZ 1136068..1136265 (+) 198 WP_008348507.1 ComZ family protein Regulator
  FED49_RS05905 - 1136468..1136701 (-) 234 WP_017360173.1 hypothetical protein -
  FED49_RS05910 - 1136871..1137809 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  FED49_RS05915 fabF 1137831..1139072 (+) 1242 WP_060780964.1 beta-ketoacyl-ACP synthase II -
  FED49_RS05920 - 1139150..1139944 (+) 795 WP_017360172.1 DUF2268 domain-containing protein -
  FED49_RS05925 - 1140115..1141095 (+) 981 WP_047945538.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=366932 FED49_RS05900 WP_008348507.1 1136068..1136265(+) (comZ) [Bacillus altitudinis strain HQ-51-Ba]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=366932 FED49_RS05900 WP_008348507.1 1136068..1136265(+) (comZ) [Bacillus altitudinis strain HQ-51-Ba]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment