Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FED49_RS05505 Genome accession   NZ_CP040747
Coordinates   1054423..1055373 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain HQ-51-Ba     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1049423..1060373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FED49_RS05485 - 1050658..1051140 (+) 483 WP_046343108.1 hypothetical protein -
  FED49_RS05490 - 1051171..1052610 (-) 1440 WP_175415451.1 PLP-dependent aminotransferase family protein -
  FED49_RS05495 - 1052754..1053923 (+) 1170 WP_074042117.1 MFS transporter -
  FED49_RS05500 - 1053986..1054264 (+) 279 WP_048001722.1 barstar family protein -
  FED49_RS05505 ceuB 1054423..1055373 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  FED49_RS05510 - 1055366..1056316 (+) 951 WP_138825495.1 iron chelate uptake ABC transporter family permease subunit -
  FED49_RS05515 - 1056307..1057065 (+) 759 WP_057079732.1 ABC transporter ATP-binding protein -
  FED49_RS05520 - 1057088..1058032 (+) 945 WP_138825497.1 siderophore ABC transporter substrate-binding protein -
  FED49_RS05525 - 1058171..1059127 (+) 957 WP_007499147.1 LCP family protein -
  FED49_RS05535 - 1059360..1059794 (-) 435 WP_072367597.1 enoyl-CoA hydratase -
  FED49_RS05540 - 1059881..1060243 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=366928 FED49_RS05505 WP_017366964.1 1054423..1055373(+) (ceuB) [Bacillus altitudinis strain HQ-51-Ba]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=366928 FED49_RS05505 WP_017366964.1 1054423..1055373(+) (ceuB) [Bacillus altitudinis strain HQ-51-Ba]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGTCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTTGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGGGTGATTATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATTATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment