Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | MRUB_RS13760 | Genome accession | NC_013946 |
| Coordinates | 2779474..2780139 (+) | Length | 221 a.a. |
| NCBI ID | WP_013014986.1 | Uniprot ID | - |
| Organism | Meiothermus ruber DSM 1279 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2774474..2785139
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MRUB_RS13745 (Mrub_2737) | - | 2775518..2776981 (+) | 1464 | WP_013014983.1 | lyase family protein | - |
| MRUB_RS13750 (Mrub_2738) | - | 2777142..2778149 (+) | 1008 | WP_013014984.1 | isocitrate/isopropylmalate dehydrogenase family protein | - |
| MRUB_RS13755 (Mrub_2739) | pilM | 2778345..2779481 (+) | 1137 | WP_013014985.1 | type IV pilus assembly protein PilM | Machinery gene |
| MRUB_RS13760 (Mrub_2740) | pilN | 2779474..2780139 (+) | 666 | WP_013014986.1 | competence protein | Machinery gene |
| MRUB_RS13765 (Mrub_2741) | pilO | 2780141..2780737 (+) | 597 | WP_013014987.1 | type 4a pilus biogenesis protein PilO | - |
| MRUB_RS13770 (Mrub_2742) | - | 2780734..2781759 (+) | 1026 | WP_013014988.1 | hypothetical protein | - |
| MRUB_RS13775 (Mrub_2743) | - | 2781769..2783298 (+) | 1530 | WP_013014989.1 | secretin N-terminal domain-containing protein | - |
| MRUB_RS13780 (Mrub_2744) | aroC | 2783395..2784546 (+) | 1152 | WP_013014990.1 | chorismate synthase | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 24828.27 Da Isoelectric Point: 11.0311
>NTDB_id=36688 MRUB_RS13760 WP_013014986.1 2779474..2780139(+) (pilN) [Meiothermus ruber DSM 1279]
MIKLNLLPKNLRRRVEPGWWRLAAVAVVLAVLGTVAFLHLSTLSRVQALENQRDQLQVEVDVLRPFIAEQNRLNQQQREL
EQLLAVRNQLRERFVPWSDNLALVINQIPREGRRFGVALRSIGTKVLTPQEVQSNVQNGLYDGKPVNVEFNLQGEAIGQN
ALIRFVEAFETSPRFGINFQSASLDQQRQLYTFGATIGLVRPTSQTTSNTSGGENSGSPSR
MIKLNLLPKNLRRRVEPGWWRLAAVAVVLAVLGTVAFLHLSTLSRVQALENQRDQLQVEVDVLRPFIAEQNRLNQQQREL
EQLLAVRNQLRERFVPWSDNLALVINQIPREGRRFGVALRSIGTKVLTPQEVQSNVQNGLYDGKPVNVEFNLQGEAIGQN
ALIRFVEAFETSPRFGINFQSASLDQQRQLYTFGATIGLVRPTSQTTSNTSGGENSGSPSR
Nucleotide
Download Length: 666 bp
>NTDB_id=36688 MRUB_RS13760 WP_013014986.1 2779474..2780139(+) (pilN) [Meiothermus ruber DSM 1279]
TTGATTAAACTCAACCTCCTGCCCAAGAACCTGCGCCGTCGGGTTGAGCCCGGCTGGTGGCGCCTGGCCGCTGTGGCGGT
GGTGCTCGCGGTGCTGGGGACGGTGGCCTTCCTCCATCTCTCTACGCTCTCAAGGGTTCAGGCACTGGAGAACCAGCGCG
ACCAGCTCCAGGTAGAGGTGGATGTGCTACGCCCCTTCATCGCCGAGCAAAACCGCCTCAACCAACAACAGCGCGAACTC
GAGCAGCTCCTAGCCGTGCGCAACCAGCTACGCGAACGTTTCGTGCCCTGGTCGGACAACCTGGCCCTGGTCATCAATCA
GATTCCACGGGAAGGCCGCCGGTTTGGGGTGGCCCTGCGCAGCATCGGCACCAAAGTCCTCACGCCCCAAGAAGTCCAAA
GCAACGTACAGAACGGTCTATACGACGGTAAGCCGGTCAACGTGGAATTCAACCTCCAAGGCGAAGCCATCGGCCAGAAC
GCCCTGATTCGCTTCGTTGAGGCCTTCGAAACCTCGCCGCGCTTCGGCATTAACTTCCAAAGTGCCAGCCTGGATCAGCA
GCGGCAGCTTTACACCTTTGGGGCCACCATCGGCCTGGTTCGGCCGACCTCGCAAACCACCAGCAACACATCGGGAGGTG
AAAATAGTGGTAGCCCTTCTCGCTAG
TTGATTAAACTCAACCTCCTGCCCAAGAACCTGCGCCGTCGGGTTGAGCCCGGCTGGTGGCGCCTGGCCGCTGTGGCGGT
GGTGCTCGCGGTGCTGGGGACGGTGGCCTTCCTCCATCTCTCTACGCTCTCAAGGGTTCAGGCACTGGAGAACCAGCGCG
ACCAGCTCCAGGTAGAGGTGGATGTGCTACGCCCCTTCATCGCCGAGCAAAACCGCCTCAACCAACAACAGCGCGAACTC
GAGCAGCTCCTAGCCGTGCGCAACCAGCTACGCGAACGTTTCGTGCCCTGGTCGGACAACCTGGCCCTGGTCATCAATCA
GATTCCACGGGAAGGCCGCCGGTTTGGGGTGGCCCTGCGCAGCATCGGCACCAAAGTCCTCACGCCCCAAGAAGTCCAAA
GCAACGTACAGAACGGTCTATACGACGGTAAGCCGGTCAACGTGGAATTCAACCTCCAAGGCGAAGCCATCGGCCAGAAC
GCCCTGATTCGCTTCGTTGAGGCCTTCGAAACCTCGCCGCGCTTCGGCATTAACTTCCAAAGTGCCAGCCTGGATCAGCA
GCGGCAGCTTTACACCTTTGGGGCCACCATCGGCCTGGTTCGGCCGACCTCGCAAACCACCAGCAACACATCGGGAGGTG
AAAATAGTGGTAGCCCTTCTCGCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Thermus thermophilus HB27 |
56.566 |
89.593 |
0.507 |