Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   FGE23_RS10790 Genome accession   NZ_CP040672
Coordinates   2096696..2097352 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain X030     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2091696..2102352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGE23_RS10765 oppF 2092225..2093142 (+) 918 WP_070081625.1 oligopeptide ABC transporter ATP-binding protein OppF -
  FGE23_RS10770 - 2093249..2094436 (+) 1188 WP_146276505.1 putative glycoside hydrolase -
  FGE23_RS10775 - 2094554..2095132 (+) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  FGE23_RS10780 spx 2095311..2095706 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  FGE23_RS10785 - 2095764..2096420 (-) 657 WP_003155033.1 TerC family protein -
  FGE23_RS10790 mecA 2096696..2097352 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  FGE23_RS10795 - 2097503..2098663 (+) 1161 WP_146276507.1 competence protein CoiA family protein -
  FGE23_RS10800 pepF 2098891..2100720 (+) 1830 WP_003155028.1 oligoendopeptidase F Regulator
  FGE23_RS19820 - 2100758..2100925 (-) 168 WP_003155026.1 hypothetical protein -
  FGE23_RS10805 spxH 2101211..2102113 (-) 903 WP_146276509.1 protease adaptor protein SpxH -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=366368 FGE23_RS10790 WP_003155032.1 2096696..2097352(+) (mecA) [Bacillus amyloliquefaciens strain X030]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=366368 FGE23_RS10790 WP_003155032.1 2096696..2097352(+) (mecA) [Bacillus amyloliquefaciens strain X030]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCTTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895


Multiple sequence alignment