Detailed information    

insolico Bioinformatically predicted

Overview


Name   treR   Type   Regulator
Locus tag   SMUNN2025_RS09195 Genome accession   NC_013928
Coordinates   1890322..1891035 (+) Length   237 a.a.
NCBI ID   WP_002262353.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1885322..1896035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS10660 - 1886097..1886441 (-) 345 Protein_1777 lipase -
  SMUNN2025_RS09185 (SmuNN2025_1784) treC 1886527..1888155 (-) 1629 WP_002278938.1 alpha,alpha-phosphotrehalase -
  SMUNN2025_RS09190 (SmuNN2025_1785) treP 1888181..1890148 (-) 1968 WP_002266263.1 PTS system trehalose-specific EIIBC component -
  SMUNN2025_RS09195 (SmuNN2025_1786) treR 1890322..1891035 (+) 714 WP_002262353.1 trehalose operon repressor Regulator
  SMUNN2025_RS09200 (SmuNN2025_1788) dexA 1891382..1893934 (-) 2553 WP_079993480.1 dextranase DexA -
  SMUNN2025_RS09205 (SmuNN2025_1789) dtd 1894417..1894863 (-) 447 WP_002266260.1 D-aminoacyl-tRNA deacylase -

Sequence


Protein


Download         Length: 237 a.a.        Molecular weight: 27795.12 Da        Isoelectric Point: 9.7425

>NTDB_id=36618 SMUNN2025_RS09195 WP_002262353.1 1890322..1891035(+) (treR) [Streptococcus mutans NN2025]
MKKYEIIFKKLEEDILKGHYQMGDYLPPEMELSQTYASSRDTVRKALQLLTKAGFIKTVQGRGSQIIKRERINFPVSQLT
SYQELVKQLQMNVKTNVIAIDKLIIDEKLTKLTGFENKGLVWRITRQRVIDGVASILDTDYLDKALIPHMTREIAEHSIY
DYLENQLKLDIAYAQKIITIDQVSQKDKILLDLDSENHVVSVKSKVYLSNQQQFQFTESRHKLEKFRFVDFARRHRD

Nucleotide


Download         Length: 714 bp        

>NTDB_id=36618 SMUNN2025_RS09195 WP_002262353.1 1890322..1891035(+) (treR) [Streptococcus mutans NN2025]
ATGAAAAAATATGAAATTATTTTTAAAAAACTAGAAGAAGATATTCTCAAAGGACACTATCAAATGGGTGACTATCTTCC
CCCTGAAATGGAACTTAGCCAGACCTATGCTAGCAGCCGAGATACTGTTAGAAAGGCTTTACAGCTCTTGACTAAGGCAG
GTTTTATTAAAACAGTACAGGGAAGAGGATCCCAAATTATCAAGCGTGAGCGCATTAACTTTCCTGTTTCTCAACTAACC
AGCTATCAAGAATTGGTTAAACAATTGCAGATGAATGTCAAGACAAATGTTATTGCTATTGATAAACTGATTATTGATGA
GAAACTCACCAAACTAACCGGTTTTGAAAATAAAGGTCTTGTCTGGCGCATCACAAGACAGCGCGTCATAGACGGCGTTG
CTTCCATTTTAGATACGGATTATTTGGATAAAGCATTGATTCCTCATATGACCAGAGAAATCGCTGAACATTCTATCTAT
GATTATCTTGAAAATCAACTTAAGCTGGACATTGCCTATGCTCAAAAGATTATTACCATAGATCAAGTATCGCAAAAAGA
TAAAATTTTGCTTGATTTGGATTCTGAAAATCATGTCGTTTCGGTTAAATCTAAAGTTTATCTCAGTAATCAGCAGCAAT
TTCAATTCACTGAAAGCCGGCACAAACTGGAAAAGTTCCGTTTTGTTGACTTTGCCAGACGGCATCGTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

99.578

100

0.996


Multiple sequence alignment