Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   SMUNN2025_RS07440 Genome accession   NC_013928
Coordinates   1531910..1532950 (-) Length   346 a.a.
NCBI ID   WP_002264420.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1526910..1537950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS07420 (SmuNN2025_1447) - 1528343..1528879 (-) 537 WP_002285786.1 VanZ family protein -
  SMUNN2025_RS07425 (SmuNN2025_1448) rlmN 1528879..1529964 (-) 1086 WP_012997894.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SMUNN2025_RS07430 (SmuNN2025_1449) - 1529961..1530509 (-) 549 WP_012997895.1 YutD family protein -
  SMUNN2025_RS07435 (SmuNN2025_1450) - 1530506..1531837 (-) 1332 WP_012997896.1 bifunctional metallophosphatase/5'-nucleotidase -
  SMUNN2025_RS07440 (SmuNN2025_1451) sepM 1531910..1532950 (-) 1041 WP_002264420.1 S16 family serine protease SepM Regulator
  SMUNN2025_RS07445 (SmuNN2025_1452) coaD 1532928..1533428 (-) 501 WP_002284962.1 pantetheine-phosphate adenylyltransferase -
  SMUNN2025_RS07450 (SmuNN2025_1453) rsmD 1533418..1533957 (-) 540 WP_002267337.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SMUNN2025_RS07455 (SmuNN2025_1454) - 1534540..1536315 (-) 1776 WP_002270143.1 oleate hydratase -
  SMUNN2025_RS07460 (SmuNN2025_1455) - 1536436..1537002 (-) 567 WP_002283017.1 TetR/AcrR family transcriptional regulator -
  SMUNN2025_RS07465 (SmuNN2025_1456) - 1537201..1537839 (+) 639 WP_002283016.1 hypothetical protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37952.90 Da        Isoelectric Point: 10.1655

>NTDB_id=36604 SMUNN2025_RS07440 WP_002264420.1 1531910..1532950(-) (sepM) [Streptococcus mutans NN2025]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=36604 SMUNN2025_RS07440 WP_002264420.1 1531910..1532950(-) (sepM) [Streptococcus mutans NN2025]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAAGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGTTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCTCATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCCTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCCGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCTAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(131-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.711

100

0.997

Multiple sequence alignment