Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   FBF22_RS06835 Genome accession   NZ_CP040618
Coordinates   1346356..1347540 (-) Length   394 a.a.
NCBI ID   WP_002885250.1    Uniprot ID   A0A0U2SRQ2
Organism   Campylobacter sp. CFSAN093260     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1341356..1352540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBF22_RS06810 (FBF22_06825) fliL 1342504..1343040 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  FBF22_RS06815 (FBF22_06830) acpS 1343040..1343387 (+) 348 WP_002857939.1 holo-ACP synthase -
  FBF22_RS06820 (FBF22_06835) - 1343388..1343807 (-) 420 WP_002780440.1 hypothetical protein -
  FBF22_RS06825 (FBF22_06840) - 1343804..1345165 (-) 1362 WP_002780438.1 cytochrome P450 -
  FBF22_RS06830 (FBF22_06845) - 1345162..1346283 (-) 1122 WP_002885249.1 hypothetical protein -
  FBF22_RS06835 (FBF22_06850) kpsS 1346356..1347540 (-) 1185 WP_002885250.1 capsule polysaccharide modification protein KpsS Regulator
  FBF22_RS06840 (FBF22_06855) - 1347537..1349606 (-) 2070 WP_002885252.1 capsular polysaccharide biosynthesis protein -
  FBF22_RS06845 (FBF22_06860) - 1349603..1350115 (-) 513 WP_052777764.1 cytidine diphosphoramidate kinase -
  FBF22_RS06850 (FBF22_06865) - 1350105..1350866 (-) 762 WP_002825812.1 CTP:phosphoglutamine cytidylyltransferase -
  FBF22_RS06855 (FBF22_06870) - 1350868..1351470 (-) 603 WP_002885258.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46851.47 Da        Isoelectric Point: 9.8716

>NTDB_id=365791 FBF22_RS06835 WP_002885250.1 1346356..1347540(-) (kpsS) [Campylobacter sp. CFSAN093260]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYNITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHIEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=365791 FBF22_RS06835 WP_002885250.1 1346356..1347540(-) (kpsS) [Campylobacter sp. CFSAN093260]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAATATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATATAG
AAGGAAGAGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U2SRQ2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.731

100

0.987


Multiple sequence alignment