Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FBF22_RS06545 Genome accession   NZ_CP040618
Coordinates   1283511..1284479 (+) Length   322 a.a.
NCBI ID   WP_002882700.1    Uniprot ID   A0A690GGM2
Organism   Campylobacter sp. CFSAN093260     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1278511..1289479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBF22_RS06520 (FBF22_06535) - 1279421..1280146 (-) 726 WP_002884177.1 phosphatidate cytidylyltransferase -
  FBF22_RS06525 (FBF22_06540) - 1280155..1280493 (-) 339 WP_002875268.1 hypothetical protein -
  FBF22_RS06530 (FBF22_06545) - 1280495..1281802 (-) 1308 WP_002884176.1 NFACT family protein -
  FBF22_RS06535 (FBF22_06550) - 1281864..1282439 (+) 576 WP_002884175.1 molybdenum cofactor guanylyltransferase -
  FBF22_RS06540 (FBF22_06555) - 1282436..1283425 (+) 990 WP_002860788.1 phospholipase A -
  FBF22_RS06545 (FBF22_06560) ceuB 1283511..1284479 (+) 969 WP_002882700.1 ABC transporter permease Machinery gene
  FBF22_RS06550 (FBF22_06565) - 1284472..1285410 (+) 939 WP_002884174.1 iron chelate uptake ABC transporter family permease subunit -
  FBF22_RS06555 (FBF22_06570) - 1285407..1286162 (+) 756 WP_052786822.1 ABC transporter ATP-binding protein -
  FBF22_RS06560 (FBF22_06575) ceuB 1286175..1287167 (+) 993 WP_002867307.1 enterochelin ABC transporter substrate-binding protein CeuB -
  FBF22_RS06570 (FBF22_06585) - 1287393..1287947 (-) 555 WP_002884169.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35441.35 Da        Isoelectric Point: 9.6678

>NTDB_id=365789 FBF22_RS06545 WP_002882700.1 1283511..1284479(+) (ceuB) [Campylobacter sp. CFSAN093260]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=365789 FBF22_RS06545 WP_002882700.1 1283511..1284479(+) (ceuB) [Campylobacter sp. CFSAN093260]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A690GGM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment