Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | FBF22_RS05240 | Genome accession | NZ_CP040618 |
| Coordinates | 1019417..1019719 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter sp. CFSAN093260 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1014417..1024719
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FBF22_RS05215 (FBF22_05230) | rpsR | 1014779..1015039 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| FBF22_RS05220 (FBF22_05235) | lon | 1015100..1017475 (-) | 2376 | WP_002885146.1 | endopeptidase La | - |
| FBF22_RS05225 (FBF22_05240) | - | 1017492..1018139 (-) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| FBF22_RS05230 (FBF22_05245) | fliW | 1018300..1018689 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| FBF22_RS05235 (FBF22_05250) | proC | 1018689..1019420 (+) | 732 | WP_002885405.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| FBF22_RS05240 (FBF22_05255) | ctsT | 1019417..1019719 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| FBF22_RS05245 (FBF22_05260) | - | 1019716..1020378 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| FBF22_RS05250 (FBF22_05265) | - | 1020375..1020827 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| FBF22_RS05255 (FBF22_05270) | - | 1020824..1021453 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| FBF22_RS05260 (FBF22_05275) | thiE | 1021431..1022063 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| FBF22_RS05265 (FBF22_05280) | thiD | 1022053..1022865 (-) | 813 | WP_002885404.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FBF22_RS05270 (FBF22_05285) | - | 1022862..1023548 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| FBF22_RS05275 (FBF22_05290) | - | 1023545..1024306 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=365782 FBF22_RS05240 WP_002853046.1 1019417..1019719(+) (ctsT) [Campylobacter sp. CFSAN093260]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=365782 FBF22_RS05240 WP_002853046.1 1019417..1019719(+) (ctsT) [Campylobacter sp. CFSAN093260]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |