Detailed information NTG0365729

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: FBF19_RS05600
• Genome accession: NZ_CP040615
• Coordinates: 1088186..1089145 (+)
• Length: 319 a.a.
• NCBI ID: WP_002871702.1
• Uniprot ID: A0A5T0XJ57
• Organism: Campylobacter sp. CFSAN093256
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1083186..1094145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FBF19_RS05575 (FBF19_05630)	neuC	1083780..1084904 (+)	1125	WP_002871707.1	UDP-N-acetylglucosamine 2-epimerase	-
FBF19_RS05580 (FBF19_05635)	-	1084897..1085844 (+)	948	WP_002896736.1	glycosyltransferase	-
FBF19_RS05585 (FBF19_05640)	-	1085841..1086506 (+)	666	WP_002871705.1	acylneuraminate cytidylyltransferase family protein	-
FBF19_RS08615	-	1086494..1086667 (+)	174	WP_002896733.1	hypothetical protein	-
FBF19_RS08620	-	1086793..1087323 (+)	531	WP_002920284.1	CatB-related O-acetyltransferase	-
FBF19_RS05595 (FBF19_05650)	-	1087315..1088127 (-)	813	WP_002871703.1	glycosyltransferase family 2 protein	-
FBF19_RS05600 (FBF19_05655)	waaF	1088186..1089145 (+)	960	WP_002871702.1	lipopolysaccharide heptosyltransferase II	Regulator
FBF19_RS05605 (FBF19_05660)	gmhA	1089126..1089686 (-)	561	WP_002787744.1	D-sedoheptulose 7-phosphate isomerase	-
FBF19_RS05610 (FBF19_05665)	rfaE1	1089683..1091068 (-)	1386	WP_002896702.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
FBF19_RS05615 (FBF19_05670)	rfaD	1091061..1092014 (-)	954	WP_002871699.1	ADP-glyceromanno-heptose 6-epimerase	-
FBF19_RS05620 (FBF19_05675)	gmhB	1092015..1092576 (-)	562	Protein_1091	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
FBF19_RS05625 (FBF19_05680)	-	1092657..1092959 (+)	303	WP_002852762.1	cytochrome c	-
FBF19_RS05630 (FBF19_05685)	ccoS	1092982..1093188 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36703.22 Da
• Isoelectric Point: 10.3737

>NTDB_id=365729 FBF19_RS05600 WP_002871702.1 1088186..1089145(+) (waaF) [Campylobacter sp. CFSAN093256]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGSTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=365729 FBF19_RS05600 WP_002871702.1 1088186..1089145(+) (waaF) [Campylobacter sp. CFSAN093256]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCTCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (97-294)

3D structure

• AlphaFold DB: A0A5T0XJ57

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.357	100	0.944