Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | FBF19_RS05255 | Genome accession | NZ_CP040615 |
| Coordinates | 1019100..1019402 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter sp. CFSAN093256 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1014100..1024402
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FBF19_RS05230 (FBF19_05285) | rpsR | 1014462..1014722 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| FBF19_RS05235 (FBF19_05290) | lon | 1014783..1017158 (-) | 2376 | WP_002878791.1 | endopeptidase La | - |
| FBF19_RS05240 (FBF19_05295) | - | 1017175..1017822 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| FBF19_RS05245 (FBF19_05300) | fliW | 1017983..1018372 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| FBF19_RS05250 (FBF19_05305) | proC | 1018372..1019103 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| FBF19_RS05255 (FBF19_05310) | ctsT | 1019100..1019402 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| FBF19_RS05260 (FBF19_05315) | - | 1019399..1020061 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| FBF19_RS05265 (FBF19_05320) | - | 1020058..1020510 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| FBF19_RS05270 (FBF19_05325) | - | 1020507..1021136 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| FBF19_RS05275 (FBF19_05330) | thiE | 1021114..1021746 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| FBF19_RS05280 (FBF19_05335) | thiD | 1021736..1022548 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FBF19_RS05285 (FBF19_05340) | - | 1022545..1023231 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| FBF19_RS05290 (FBF19_05345) | - | 1023228..1023989 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=365727 FBF19_RS05255 WP_002853046.1 1019100..1019402(+) (ctsT) [Campylobacter sp. CFSAN093256]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=365727 FBF19_RS05255 WP_002853046.1 1019100..1019402(+) (ctsT) [Campylobacter sp. CFSAN093256]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |