Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | FBE87_RS05265 | Genome accession | NZ_CP040613 |
| Coordinates | 1012744..1013046 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter sp. CFSAN093246 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1007744..1018046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FBE87_RS05240 (FBE87_05270) | rpsR | 1008107..1008367 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| FBE87_RS05245 (FBE87_05275) | lon | 1008427..1010802 (-) | 2376 | WP_168977230.1 | endopeptidase La | - |
| FBE87_RS05250 (FBE87_05280) | - | 1010819..1011466 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| FBE87_RS05255 (FBE87_05285) | fliW | 1011627..1012016 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| FBE87_RS05260 (FBE87_05290) | proC | 1012016..1012747 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| FBE87_RS05265 (FBE87_05295) | ctsT | 1012744..1013046 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| FBE87_RS05270 (FBE87_05300) | - | 1013043..1013705 (+) | 663 | WP_052785236.1 | hypothetical protein | - |
| FBE87_RS05275 (FBE87_05305) | - | 1013702..1014154 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| FBE87_RS05280 (FBE87_05310) | - | 1014151..1014780 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| FBE87_RS05285 (FBE87_05315) | thiE | 1014758..1015390 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| FBE87_RS05290 (FBE87_05320) | thiD | 1015380..1016192 (-) | 813 | WP_002899485.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FBE87_RS05295 (FBE87_05325) | - | 1016189..1016875 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| FBE87_RS05300 (FBE87_05330) | - | 1016872..1017633 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=365699 FBE87_RS05265 WP_002853046.1 1012744..1013046(+) (ctsT) [Campylobacter sp. CFSAN093246]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=365699 FBE87_RS05265 WP_002853046.1 1012744..1013046(+) (ctsT) [Campylobacter sp. CFSAN093246]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |