Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FBE96_RS06625 Genome accession   NZ_CP040612
Coordinates   1296691..1297659 (+) Length   322 a.a.
NCBI ID   WP_002872671.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter sp. CFSAN093241     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1291691..1302659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBE96_RS06600 (FBE96_06660) - 1292601..1293326 (-) 726 WP_002858027.1 phosphatidate cytidylyltransferase -
  FBE96_RS06605 (FBE96_06665) - 1293335..1293673 (-) 339 WP_002852397.1 hypothetical protein -
  FBE96_RS06610 (FBE96_06670) - 1293675..1294982 (-) 1308 WP_032586025.1 NFACT family protein -
  FBE96_RS06615 (FBE96_06675) - 1295044..1295619 (+) 576 WP_002858185.1 molybdenum cofactor guanylyltransferase -
  FBE96_RS06620 (FBE96_06680) - 1295616..1296605 (+) 990 WP_032586027.1 phospholipase A -
  FBE96_RS06625 (FBE96_06685) ceuB 1296691..1297659 (+) 969 WP_002872671.1 ABC transporter permease Machinery gene
  FBE96_RS06630 (FBE96_06690) - 1297652..1298590 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  FBE96_RS06635 (FBE96_06695) - 1298587..1299342 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  FBE96_RS06640 (FBE96_06700) ceuB 1299355..1300347 (+) 993 WP_002852385.1 enterochelin ABC transporter substrate-binding protein CeuB -
  FBE96_RS06650 (FBE96_06710) - 1300573..1301127 (-) 555 WP_002871963.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=365679 FBE96_RS06625 WP_002872671.1 1296691..1297659(+) (ceuB) [Campylobacter sp. CFSAN093241]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=365679 FBE96_RS06625 WP_002872671.1 1296691..1297659(+) (ceuB) [Campylobacter sp. CFSAN093241]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment