Detailed information NTG0365674

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: FBE96_RS05615
• Genome accession: NZ_CP040612
• Coordinates: 1094519..1095478 (+)
• Length: 319 a.a.
• NCBI ID: WP_002871702.1
• Uniprot ID: A0A5T0XJ57
• Organism: Campylobacter sp. CFSAN093241
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1089519..1100478

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FBE96_RS05590 (FBE96_05645)	neuC	1090112..1091236 (+)	1125	WP_002871707.1	UDP-N-acetylglucosamine 2-epimerase	-
FBE96_RS05595 (FBE96_05650)	-	1091229..1092176 (+)	948	WP_002896736.1	glycosyltransferase	-
FBE96_RS05600 (FBE96_05655)	-	1092173..1092838 (+)	666	WP_002871705.1	acylneuraminate cytidylyltransferase family protein	-
FBE96_RS05605 (FBE96_05660)	-	1092826..1093656 (+)	831	WP_002906695.1	CatB-related O-acetyltransferase	-
FBE96_RS05610 (FBE96_05665)	-	1093648..1094460 (-)	813	WP_002871703.1	glycosyltransferase family 2 protein	-
FBE96_RS05615 (FBE96_05670)	waaF	1094519..1095478 (+)	960	WP_002871702.1	lipopolysaccharide heptosyltransferase II	Regulator
FBE96_RS05620 (FBE96_05675)	gmhA	1095459..1096019 (-)	561	WP_002787744.1	D-sedoheptulose 7-phosphate isomerase	-
FBE96_RS05625 (FBE96_05680)	rfaE1	1096016..1097401 (-)	1386	WP_002896702.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
FBE96_RS05630 (FBE96_05685)	rfaD	1097394..1098347 (-)	954	WP_002871699.1	ADP-glyceromanno-heptose 6-epimerase	-
FBE96_RS05635 (FBE96_05690)	gmhB	1098348..1098909 (-)	562	Protein_1089	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
FBE96_RS05640 (FBE96_05695)	-	1098990..1099292 (+)	303	WP_002852762.1	cytochrome c	-
FBE96_RS05645 (FBE96_05700)	ccoS	1099315..1099521 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36703.22 Da
• Isoelectric Point: 10.3737

>NTDB_id=365674 FBE96_RS05615 WP_002871702.1 1094519..1095478(+) (waaF) [Campylobacter sp. CFSAN093241]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGSTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=365674 FBE96_RS05615 WP_002871702.1 1094519..1095478(+) (waaF) [Campylobacter sp. CFSAN093241]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCTCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (97-294)

3D structure

• AlphaFold DB: A0A5T0XJ57

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.357	100	0.944