Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | FBF21_RS05765 | Genome accession | NZ_CP040611 |
| Coordinates | 1110692..1110994 (+) | Length | 100 a.a. |
| NCBI ID | WP_002875928.1 | Uniprot ID | - |
| Organism | Campylobacter sp. CFSAN093238 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1105692..1115994
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FBF21_RS05740 (FBF21_05775) | rpsR | 1106055..1106315 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| FBF21_RS05745 (FBF21_05780) | lon | 1106375..1108750 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| FBF21_RS05750 (FBF21_05785) | - | 1108767..1109414 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| FBF21_RS05755 (FBF21_05790) | fliW | 1109575..1109964 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| FBF21_RS05760 (FBF21_05795) | proC | 1109964..1110695 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| FBF21_RS05765 (FBF21_05800) | ctsT | 1110692..1110994 (+) | 303 | WP_002875928.1 | hypothetical protein | Machinery gene |
| FBF21_RS05770 (FBF21_05805) | - | 1110991..1111653 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| FBF21_RS05775 (FBF21_05810) | - | 1111650..1112102 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| FBF21_RS05780 (FBF21_05815) | - | 1112099..1112728 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| FBF21_RS05785 (FBF21_05820) | thiE | 1112706..1113338 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| FBF21_RS05790 (FBF21_05825) | thiD | 1113328..1114140 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FBF21_RS05795 (FBF21_05830) | - | 1114137..1114823 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| FBF21_RS05800 (FBF21_05835) | - | 1114820..1115581 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12161.32 Da Isoelectric Point: 9.0653
>NTDB_id=365645 FBF21_RS05765 WP_002875928.1 1110692..1110994(+) (ctsT) [Campylobacter sp. CFSAN093238]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=365645 FBF21_RS05765 WP_002875928.1 1110692..1110994(+) (ctsT) [Campylobacter sp. CFSAN093238]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |