Detailed information NTG0365619

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: FBF06_RS06595
• Genome accession: NZ_CP040610
• Coordinates: 1255407..1256366 (+)
• Length: 319 a.a.
• NCBI ID: WP_032586265.1
• Uniprot ID: A0A5Y8BL20
• Organism: Campylobacter sp. CFSAN093227
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1250407..1261366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FBF06_RS06570 (FBF06_06595)	-	1250745..1251524 (-)	780	WP_168977591.1	glycosyltransferase family 25 protein	-
FBF06_RS10035 (FBF06_06600)	-	1251521..1252453 (-)	933	WP_100624278.1	glycosyltransferase family 2 protein	-
FBF06_RS06580 (FBF06_06605)	-	1252446..1253336 (-)	891	WP_002801401.1	glycosyltransferase	-
FBF06_RS06585 (FBF06_06610)	-	1253348..1254490 (-)	1143	WP_168977592.1	glycosyltransferase family 8 protein	-
FBF06_RS06590 (FBF06_06615)	-	1254530..1255348 (-)	819	WP_168977593.1	glycosyltransferase family 2 protein	-
FBF06_RS06595 (FBF06_06620)	waaF	1255407..1256366 (+)	960	WP_032586265.1	glycosyltransferase family 9 protein	Regulator
FBF06_RS06600 (FBF06_06625)	gmhA	1256347..1256907 (-)	561	WP_023890815.1	D-sedoheptulose 7-phosphate isomerase	-
FBF06_RS06605 (FBF06_06630)	rfaE1	1256904..1258289 (-)	1386	WP_002896702.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
FBF06_RS06610 (FBF06_06635)	rfaD	1258282..1259235 (-)	954	WP_002872242.1	ADP-glyceromanno-heptose 6-epimerase	-
FBF06_RS06615 (FBF06_06640)	gmhB	1259232..1259796 (-)	565	Protein_1306	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
FBF06_RS06620 (FBF06_06645)	-	1259877..1260179 (+)	303	WP_002852762.1	cytochrome c	-
FBF06_RS06625 (FBF06_06650)	ccoS	1260202..1260408 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.49 Da
• Isoelectric Point: 10.3923

>NTDB_id=365619 FBF06_RS06595 WP_032586265.1 1255407..1256366(+) (waaF) [Campylobacter sp. CFSAN093227]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=365619 FBF06_RS06595 WP_032586265.1 1255407..1256366(+) (waaF) [Campylobacter sp. CFSAN093227]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A5Y8BL20

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94