Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | FBF06_RS06275 | Genome accession | NZ_CP040610 |
| Coordinates | 1191650..1191952 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter sp. CFSAN093227 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1186650..1196952
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FBF06_RS06250 (FBF06_06275) | rpsR | 1187013..1187273 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| FBF06_RS06255 (FBF06_06280) | lon | 1187333..1189708 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| FBF06_RS06260 (FBF06_06285) | - | 1189725..1190372 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| FBF06_RS06265 (FBF06_06290) | fliW | 1190533..1190922 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| FBF06_RS06270 (FBF06_06295) | proC | 1190922..1191653 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| FBF06_RS06275 (FBF06_06300) | ctsT | 1191650..1191952 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| FBF06_RS06280 (FBF06_06305) | - | 1191949..1192611 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| FBF06_RS06285 (FBF06_06310) | - | 1192608..1193060 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| FBF06_RS06290 (FBF06_06315) | - | 1193057..1193686 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| FBF06_RS06295 (FBF06_06320) | thiE | 1193664..1194296 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| FBF06_RS06300 (FBF06_06325) | thiD | 1194286..1195098 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FBF06_RS06305 (FBF06_06330) | - | 1195095..1195781 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| FBF06_RS06310 (FBF06_06335) | - | 1195778..1196539 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=365617 FBF06_RS06275 WP_002853046.1 1191650..1191952(+) (ctsT) [Campylobacter sp. CFSAN093227]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=365617 FBF06_RS06275 WP_002853046.1 1191650..1191952(+) (ctsT) [Campylobacter sp. CFSAN093227]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |