Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FBF11_RS06530 Genome accession   NZ_CP040607
Coordinates   1271828..1272808 (+) Length   326 a.a.
NCBI ID   WP_057096975.1    Uniprot ID   A0A698TUM2
Organism   Campylobacter sp. CFSAN093224     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1266828..1277808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBF11_RS06505 (FBF11_06555) - 1267738..1268463 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  FBF11_RS06510 (FBF11_06560) - 1268472..1268810 (-) 339 WP_002852397.1 hypothetical protein -
  FBF11_RS06515 (FBF11_06565) - 1268812..1270119 (-) 1308 WP_002864240.1 NFACT family protein -
  FBF11_RS06520 (FBF11_06570) - 1270181..1270756 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  FBF11_RS06525 (FBF11_06575) - 1270753..1271742 (+) 990 WP_002864239.1 phospholipase A -
  FBF11_RS06530 (FBF11_06580) ceuB 1271828..1272808 (+) 981 WP_057096975.1 ABC transporter permease Machinery gene
  FBF11_RS06535 (FBF11_06585) - 1272790..1273728 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  FBF11_RS06540 (FBF11_06590) - 1273725..1274480 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  FBF11_RS06545 (FBF11_06595) ceuB 1274493..1275485 (+) 993 WP_002852385.1 enterochelin ABC transporter substrate-binding protein CeuB -
  FBF11_RS06555 (FBF11_06605) - 1275711..1276265 (-) 555 WP_002855904.1 membrane protein -

Sequence

Protein


Download         Length: 326 a.a.        Molecular weight: 35838.88 Da        Isoelectric Point: 9.3636

>NTDB_id=365568 FBF11_RS06530 WP_057096975.1 1271828..1272808(+) (ceuB) [Campylobacter sp. CFSAN093224]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLVIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKKES
LCVKKC

Nucleotide


Download         Length: 981 bp        

>NTDB_id=365568 FBF11_RS06530 WP_057096975.1 1271828..1272808(+) (ceuB) [Campylobacter sp. CFSAN093224]
TTGTTTTTTAAGCATATATTAAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAGTGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAAGGAAAGT
TTATGCGTAAAAAAATGCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A698TUM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.125

98.16

0.963

Multiple sequence alignment