Detailed information NTG0365563

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: FBF11_RS05610
• Genome accession: NZ_CP040607
• Coordinates: 1087760..1088719 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter sp. CFSAN093224
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1082760..1093719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FBF11_RS05585 (FBF11_05630)	neuC	1083329..1084444 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
FBF11_RS05590 (FBF11_05635)	-	1084441..1085007 (+)	567	WP_168977465.1	hypothetical protein	-
FBF11_RS08660	-	1085091..1085306 (+)	216	Protein_1086	hypothetical protein	-
FBF11_RS05595 (FBF11_05640)	-	1085388..1086050 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
FBF11_RS05600 (FBF11_05645)	-	1086045..1086893 (-)	849	WP_019108742.1	glycosyltransferase	-
FBF11_RS05605 (FBF11_05650)	-	1086877..1087701 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
FBF11_RS05610 (FBF11_05655)	waaF	1087760..1088719 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
FBF11_RS05615 (FBF11_05660)	gmhA	1088700..1089260 (-)	561	WP_002875424.1	D-sedoheptulose 7-phosphate isomerase	-
FBF11_RS05620 (FBF11_05665)	rfaE1	1089257..1090642 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
FBF11_RS05625 (FBF11_05670)	rfaD	1090635..1091588 (-)	954	WP_057096888.1	ADP-glyceromanno-heptose 6-epimerase	-
FBF11_RS05630 (FBF11_05675)	gmhB	1091589..1092150 (-)	562	Protein_1094	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
FBF11_RS05635 (FBF11_05680)	-	1092231..1092533 (+)	303	WP_002852762.1	cytochrome c	-
FBF11_RS05640 (FBF11_05685)	ccoS	1092556..1092762 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=365563 FBF11_RS05610 WP_002875425.1 1087760..1088719(+) (waaF) [Campylobacter sp. CFSAN093224]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=365563 FBF11_RS05610 WP_002875425.1 1087760..1088719(+) (waaF) [Campylobacter sp. CFSAN093224]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1