Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | FBF11_RS05265 | Genome accession | NZ_CP040607 |
| Coordinates | 1018194..1018496 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter sp. CFSAN093224 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1013194..1023496
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FBF11_RS05240 (FBF11_05285) | rpsR | 1013557..1013817 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| FBF11_RS05245 (FBF11_05290) | lon | 1013877..1016252 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| FBF11_RS05250 (FBF11_05295) | - | 1016269..1016916 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| FBF11_RS05255 (FBF11_05300) | fliW | 1017077..1017466 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| FBF11_RS05260 (FBF11_05305) | proC | 1017466..1018197 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| FBF11_RS05265 (FBF11_05310) | ctsT | 1018194..1018496 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| FBF11_RS05270 (FBF11_05315) | - | 1018493..1019155 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| FBF11_RS05275 (FBF11_05320) | - | 1019152..1019604 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| FBF11_RS05280 (FBF11_05325) | - | 1019601..1020230 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| FBF11_RS05285 (FBF11_05330) | thiE | 1020208..1020840 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| FBF11_RS05290 (FBF11_05335) | thiD | 1020830..1021642 (-) | 813 | WP_057096921.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FBF11_RS05295 (FBF11_05340) | - | 1021639..1022325 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| FBF11_RS05300 (FBF11_05345) | - | 1022322..1023083 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=365561 FBF11_RS05265 WP_002853046.1 1018194..1018496(+) (ctsT) [Campylobacter sp. CFSAN093224]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=365561 FBF11_RS05265 WP_002853046.1 1018194..1018496(+) (ctsT) [Campylobacter sp. CFSAN093224]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |