Detailed information NTG0365459

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: LROSL1_RS10205
• Genome accession: NZ_CP040586
• Coordinates: 2105118..2106455 (-)
• Length: 445 a.a.
• NCBI ID: WP_178914498.1
• Uniprot ID: -
• Organism: Furfurilactobacillus rossiae strain L1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2100118..2111455

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LROSL1_RS10190 (LROSL1_1962)	secA	2101117..2103480 (-)	2364	WP_017262150.1	preprotein translocase subunit SecA	-
LROSL1_RS10195 (LROSL1_1963)	hpf	2103691..2104248 (-)	558	WP_017262149.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
LROSL1_RS10200 (LROSL1_1964)	-	2104423..2104926 (-)	504	WP_162129502.1	ComF family protein	-
LROSL1_RS10205 (LROSL1_1965)	comFA	2105118..2106455 (-)	1338	WP_178914498.1	DEAD/DEAH box helicase	Machinery gene
LROSL1_RS10210 (LROSL1_1966)	-	2106540..2107184 (+)	645	WP_178914499.1	YigZ family protein	-
LROSL1_RS10215 (LROSL1_1967)	-	2107300..2108190 (-)	891	WP_178914500.1	phosphate ABC transporter substrate-binding protein PstS family protein	-
LROSL1_RS10220 (LROSL1_1968)	-	2108386..2110221 (-)	1836	WP_161001591.1	APC family permease	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 50209.34 Da
• Isoelectric Point: 10.3553

>NTDB_id=365459 LROSL1_RS10205 WP_178914498.1 2105118..2106455(-) (comFA) [Furfurilactobacillus rossiae strain L1]
MNEELFGRQLTAAQLPPTFEPTDPRIVSRPAMTISGRWVRCERCHQQLEKAHVALPAGGYYCPDCLALGRITSRQSLLTI
PEPNAFPPQRNTLTWAGSLTRLQQICAQDVQSVFVKRQRHLLWAVTGAGKTEMLFLGLADALKRGDRVAVASPRVDVCIE
LFPRFQQAFTNTSMVLLHGQQTEPYRYCQFTVCTTHQLLRFYHAFDILVVDEVDAFPFAQNKQLMFAVDQAIKPNGACLY
VTATPGTELMHAVTRRQLTMSYLPLRFHGHLLPEIQCRGAWHWREKLRRGRLPTALQVAITARLRQHKRFLLFVPHVAQL
PDVAAAIRRFAPKASFVTVHAADGERVEKVAAMRQKKVDFLVTTTILERGVTFPDIDVLVLGADDAVFSTAALVQIAGRA
GRNAAAPDGKVIYWIEQTTLTLRRAIRQIQVVNQKGRRLPEWRHA

Nucleotide

• Length: 1338 bp

>NTDB_id=365459 LROSL1_RS10205 WP_178914498.1 2105118..2106455(-) (comFA) [Furfurilactobacillus rossiae strain L1]
ATGAATGAAGAATTATTTGGTCGTCAATTAACGGCCGCACAATTGCCGCCGACTTTTGAACCAACAGATCCGCGAATCGT
GTCGCGACCTGCAATGACGATCAGTGGCCGGTGGGTTCGTTGTGAACGATGCCATCAGCAACTTGAAAAAGCTCATGTGG
CATTGCCAGCAGGCGGCTACTATTGTCCAGATTGCTTGGCACTGGGACGAATTACGAGTCGTCAGTCGTTACTGACAATT
CCTGAGCCCAATGCATTTCCGCCACAAAGGAACACACTGACGTGGGCGGGATCACTGACGCGATTACAACAAATTTGTGC
GCAGGATGTTCAGAGTGTCTTCGTCAAACGCCAGCGCCATTTGTTATGGGCGGTTACGGGGGCGGGCAAAACTGAGATGC
TGTTTTTGGGATTGGCAGATGCGCTCAAACGTGGTGATCGGGTAGCAGTTGCCTCACCGCGAGTAGACGTGTGTATTGAA
TTGTTTCCACGTTTTCAACAAGCGTTTACAAACACGTCGATGGTTTTGCTCCATGGTCAGCAAACGGAACCTTATCGATA
CTGCCAGTTTACCGTGTGTACGACGCATCAACTGCTTCGATTTTATCATGCTTTTGATATTTTGGTGGTTGATGAAGTTG
ATGCCTTTCCGTTTGCACAAAACAAGCAATTAATGTTTGCCGTTGATCAAGCCATTAAACCTAATGGTGCTTGCCTATAC
GTAACCGCCACACCGGGGACTGAACTGATGCACGCAGTGACTAGGCGGCAATTAACGATGAGTTACTTGCCGTTACGATT
TCATGGTCATCTGCTGCCTGAAATCCAGTGTCGAGGAGCGTGGCACTGGCGTGAAAAATTACGTCGTGGACGCTTACCGA
CAGCTCTGCAAGTTGCCATTACAGCCCGCTTGCGTCAGCACAAACGCTTTTTGCTTTTTGTCCCGCATGTGGCACAATTG
CCAGATGTTGCCGCGGCGATCAGACGCTTTGCACCCAAGGCGTCGTTTGTCACTGTTCATGCGGCAGATGGAGAACGGGT
TGAGAAGGTGGCTGCAATGCGTCAAAAGAAAGTGGATTTTTTAGTAACGACCACCATTTTGGAACGGGGAGTGACGTTTC
CGGACATTGATGTGTTGGTGCTAGGCGCTGACGACGCGGTTTTTTCCACGGCAGCGCTAGTGCAAATCGCCGGTCGTGCG
GGCAGAAACGCAGCGGCACCGGACGGGAAAGTTATTTATTGGATTGAACAAACAACGCTTACGCTGCGCCGGGCAATCCG
TCAGATTCAAGTTGTGAACCAAAAGGGAAGGCGGTTACCCGAATGGCGTCATGCCTGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (304-403)

• Type III restriction enzyme, res subunit (ResIII) (102-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Latilactobacillus sakei subsp. sakei 23K	49.425	97.753	0.483