Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   FC605_RS21215 Genome accession   NZ_CP040528
Coordinates   383133..383273 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain PR10     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 378133..388273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FC605_RS21210 srfAB 379997..383089 (+) 3093 Protein_347 surfactin non-ribosomal peptide synthetase SrfAB -
  FC605_RS21215 comS 383133..383273 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=365055 FC605_RS21215 WP_010886404.1 383133..383273(+) (comS) [Bacillus subtilis strain PR10]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=365055 FC605_RS21215 WP_010886404.1 383133..383273(+) (comS) [Bacillus subtilis strain PR10]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment