Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | FC605_RS12500 | Genome accession | NZ_CP040528 |
| Coordinates | 2434563..2435600 (-) | Length | 345 a.a. |
| NCBI ID | WP_080529539.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain PR10 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2429563..2440600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FC605_RS12450 (FC605_12450) | tasA | 2429661..2430446 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| FC605_RS12455 (FC605_12455) | sipW | 2430510..2431082 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| FC605_RS12460 (FC605_12460) | tapA | 2431066..2431827 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| FC605_RS12465 (FC605_12465) | yqzG | 2432099..2432425 (+) | 327 | WP_029317915.1 | YqzG/YhdC family protein | - |
| FC605_RS12470 (FC605_12470) | spoIITA | 2432467..2432646 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| FC605_RS12475 (FC605_12475) | comGG | 2432717..2433091 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| FC605_RS12480 (FC605_12480) | comGF | 2433092..2433475 (-) | 384 | WP_080529536.1 | ComG operon protein ComGF | Machinery gene |
| FC605_RS12485 (FC605_12485) | comGE | 2433501..2433848 (-) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| FC605_RS12490 (FC605_12490) | comGD | 2433832..2434263 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| FC605_RS12495 (FC605_12495) | comGC | 2434253..2434549 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| FC605_RS12500 (FC605_12500) | comGB | 2434563..2435600 (-) | 1038 | WP_080529539.1 | comG operon protein ComGB | Machinery gene |
| FC605_RS12505 (FC605_12505) | comGA | 2435587..2436657 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| FC605_RS12510 (FC605_12510) | - | 2436870..2437067 (-) | 198 | WP_080529540.1 | hypothetical protein | - |
| FC605_RS12515 (FC605_12515) | corA | 2437069..2438022 (-) | 954 | WP_080529541.1 | magnesium transporter CorA | - |
| FC605_RS12520 (FC605_12520) | yqhB | 2438165..2439493 (+) | 1329 | WP_041850018.1 | hemolysin family protein | - |
| FC605_RS12525 (FC605_12525) | rsbRD | 2439546..2440382 (-) | 837 | WP_041850019.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39750.19 Da Isoelectric Point: 9.6257
>NTDB_id=365024 FC605_RS12500 WP_080529539.1 2434563..2435600(-) (comGB) [Bacillus subtilis strain PR10]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEADFSKVIFHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEADFSKVIFHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=365024 FC605_RS12500 WP_080529539.1 2434563..2435600(-) (comGB) [Bacillus subtilis strain PR10]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGCTGATTTTTCAAAAGTCATATTTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTGCAGAGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGCTGATTTTTCAAAAGTCATATTTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTGCAGAGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
98.142 |
93.623 |
0.919 |