Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   FC605_RS07750 Genome accession   NZ_CP040528
Coordinates   1470830..1471405 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain PR10     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1465830..1476405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FC605_RS07720 (FC605_07720) dapD 1466017..1466727 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  FC605_RS07725 (FC605_07725) dapI 1466797..1467921 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  FC605_RS07730 (FC605_07730) ykuS 1467983..1468228 (+) 246 WP_003232382.1 YkuS family protein -
  FC605_RS07735 (FC605_07735) mscT 1468265..1469068 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  FC605_RS07740 (FC605_07740) ahpA 1469305..1469847 (+) 543 WP_080529270.1 biofilm-specific peroxidase AhpA -
  FC605_RS07745 (FC605_07745) ykuV 1469918..1470364 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  FC605_RS07750 (FC605_07750) rok 1470830..1471405 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  FC605_RS07755 (FC605_07755) cse15 1471446..1472411 (-) 966 WP_080529271.1 spore protein Cse15 -
  FC605_RS07760 (FC605_07760) mobA 1472548..1473147 (+) 600 WP_041335768.1 molybdenum cofactor guanylyltransferase -
  FC605_RS07765 (FC605_07765) moeB 1473198..1474217 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  FC605_RS07770 (FC605_07770) glp 1474235..1475527 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  FC605_RS07775 (FC605_07775) mobB 1475488..1476009 (+) 522 WP_080529272.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=365008 FC605_RS07750 WP_003232378.1 1470830..1471405(+) (rok) [Bacillus subtilis strain PR10]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=365008 FC605_RS07750 WP_003232378.1 1470830..1471405(+) (rok) [Bacillus subtilis strain PR10]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment