Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   FC605_RS06120 Genome accession   NZ_CP040528
Coordinates   1182180..1182371 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain PR10     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1177180..1187371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FC605_RS06090 (FC605_06090) argF 1178044..1179003 (+) 960 WP_080529175.1 ornithine carbamoyltransferase -
  FC605_RS06095 (FC605_06095) yjzC 1179090..1179269 (+) 180 WP_003245356.1 YjzC family protein -
  FC605_RS06100 (FC605_06100) yjzD 1179315..1179500 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  FC605_RS06105 (FC605_06105) - 1179749..1180483 (+) 735 WP_032721340.1 hypothetical protein -
  FC605_RS06110 (FC605_06110) - 1180565..1181122 (+) 558 WP_080529176.1 hypothetical protein -
  FC605_RS06115 (FC605_06115) med 1181212..1182165 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  FC605_RS06120 (FC605_06120) comZ 1182180..1182371 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  FC605_RS06125 (FC605_06125) yjzB 1182401..1182640 (-) 240 WP_003232972.1 spore coat protein YjzB -
  FC605_RS06130 (FC605_06130) fabH 1182805..1183743 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  FC605_RS06135 (FC605_06135) fabF 1183766..1185007 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  FC605_RS06140 (FC605_06140) yjaZ 1185083..1185868 (+) 786 WP_033883592.1 DUF2268 domain-containing protein -
  FC605_RS06145 (FC605_06145) appD 1186060..1187046 (+) 987 WP_080529177.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=364999 FC605_RS06120 WP_003224559.1 1182180..1182371(+) (comZ) [Bacillus subtilis strain PR10]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=364999 FC605_RS06120 WP_003224559.1 1182180..1182371(+) (comZ) [Bacillus subtilis strain PR10]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment