Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   FC605_RS04590 Genome accession   NZ_CP040528
Coordinates   900232..901026 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain PR10     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 895232..906026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FC605_RS04560 (FC605_04560) sxzA 896071..897102 (+) 1032 WP_080529085.1 iron ABC transporter permease -
  FC605_RS04565 (FC605_04565) yfhB 897217..898098 (+) 882 WP_080529086.1 PhzF family phenazine biosynthesis isomerase -
  FC605_RS04570 (FC605_04570) yfhC 898186..898770 (+) 585 WP_003243940.1 nitroreductase -
  FC605_RS04575 (FC605_04575) yfhD 898809..899000 (-) 192 WP_003233561.1 YfhD family protein -
  FC605_RS04580 (FC605_04580) yfhE 899067..899177 (-) 111 WP_003223230.1 YfhE family protein -
  FC605_RS04585 (FC605_04585) yfhF 899232..900143 (-) 912 WP_080529087.1 TIGR01777 family oxidoreductase -
  FC605_RS04590 (FC605_04590) recX 900232..901026 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  FC605_RS04595 (FC605_04595) yfhH 901028..901348 (+) 321 WP_029726843.1 YfhH family protein -
  FC605_RS04600 (FC605_04600) yfhI 901485..902678 (+) 1194 WP_072692836.1 MFS transporter -
  FC605_RS04605 (FC605_04605) sspK 902710..902862 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  FC605_RS04610 (FC605_04610) yfhJ 902987..903256 (+) 270 WP_003243789.1 YfhJ family protein -
  FC605_RS04615 (FC605_04615) yfhK 903401..903919 (+) 519 WP_080529088.1 SH3 domain-containing protein -
  FC605_RS04620 (FC605_04620) spdL 904004..904336 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  FC605_RS04625 (FC605_04625) ephM 904323..905183 (+) 861 WP_080529089.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=364990 FC605_RS04590 WP_029726844.1 900232..901026(+) (recX) [Bacillus subtilis strain PR10]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=364990 FC605_RS04590 WP_029726844.1 900232..901026(+) (recX) [Bacillus subtilis strain PR10]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment