Detailed information NTG0036498

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJS3_RS05860
• Genome accession: NC_017281
• Coordinates: 1104585..1105535 (+)
• Length: 316 a.a.
• NCBI ID: WP_011049891.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni S3
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1099585..1110535

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJS3_RS05835 (CJS3_1182)	-	1099643..1100530 (-)	888	WP_011049886.1	glycosyltransferase family 2 protein	-
CJS3_RS05840 (CJS3_1183)	-	1100523..1101731 (-)	1209	WP_011049887.1	glycosyltransferase family 2 protein	-
CJS3_RS05845 (CJS3_1184)	-	1101809..1102471 (-)	663	WP_139889607.1	glycosyltransferase family 2 protein	-
CJS3_RS09775	-	1102506..1102784 (-)	279	WP_050783121.1	glycosyltransferase family 2 protein	-
CJS3_RS05850 (CJS3_1186)	-	1102777..1103663 (-)	887	Protein_1127	glycosyltransferase	-
CJS3_RS05855 (CJS3_1188)	waaV	1103717..1104526 (-)	810	WP_011049890.1	glycosyltransferase family 2 protein	-
CJS3_RS05860 (CJS3_1189)	waaF	1104585..1105535 (+)	951	WP_011049891.1	lipopolysaccharide heptosyltransferase II	Regulator
CJS3_RS05865 (CJS3_1190)	-	1105521..1106285 (-)	765	WP_002884483.1	glycosyltransferase family 25 protein	-
CJS3_RS05870 (CJS3_1191)	gmhA	1106285..1106845 (-)	561	WP_002869619.1	D-sedoheptulose 7-phosphate isomerase	-
CJS3_RS05875 (CJS3_1192)	rfaE1	1106842..1108227 (-)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJS3_RS05880 (CJS3_1193)	rfaD	1108220..1109173 (-)	954	WP_002867398.1	ADP-glyceromanno-heptose 6-epimerase	-
CJS3_RS05885 (CJS3_1194)	gmhB	1109174..1109735 (-)	562	Protein_1134	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJS3_RS05890 (CJS3_1195)	-	1109816..1110118 (+)	303	WP_002852762.1	cytochrome c	-
CJS3_RS05895 (CJS3_1196)	ccoS	1110141..1110347 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36213.76 Da
• Isoelectric Point: 10.2878

>NTDB_id=36498 CJS3_RS05860 WP_011049891.1 1104585..1105535(+) (waaF) [Campylobacter jejuni subsp. jejuni S3]
MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLNLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=36498 CJS3_RS05860 WP_011049891.1 1104585..1105535(+) (waaF) [Campylobacter jejuni subsp. jejuni S3]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGTTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAATCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCACATAAGTGCAGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACAAAATTTACTCAAACCTCACC
TTGGCAAAATGAAAACGCAACATTAGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.652	99.051	0.918