Detailed information NTG0364930

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: EYS05_RS17295
• Genome accession: NZ_CP040518
• Coordinates: 3723997..3725370 (-)
• Length: 457 a.a.
• NCBI ID: WP_118626403.1
• Uniprot ID: -
• Organism: Blautia sp. SC05B48
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3718997..3730370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYS05_RS17285 (EYS05_17285)	-	3723371..3723565 (-)	195	WP_138277644.1	hypothetical protein	-
EYS05_RS17290 (EYS05_17290)	-	3723641..3723874 (-)	234	WP_173733054.1	hypothetical protein	-
EYS05_RS17295 (EYS05_17295)	radA	3723997..3725370 (-)	1374	WP_118626403.1	DNA repair protein RadA	Machinery gene
EYS05_RS17300 (EYS05_17300)	-	3725364..3725777 (-)	414	WP_118626401.1	endosialidase	-
EYS05_RS17305 (EYS05_17305)	-	3725874..3728339 (-)	2466	WP_138277645.1	ATP-dependent Clp protease ATP-binding subunit	-
EYS05_RS17310 (EYS05_17310)	-	3728351..3728728 (-)	378	WP_015525911.1	GntR family transcriptional regulator	-
EYS05_RS17315 (EYS05_17315)	-	3728801..3729574 (-)	774	WP_138277646.1	SseB family protein	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49434.09 Da
• Isoelectric Point: 7.9798

>NTDB_id=364930 EYS05_RS17295 WP_118626403.1 3723997..3725370(-) (radA) [Blautia sp. SC05B48]
MLKNKKTVYFCQECGYESAKWMGQCPACKAWNTFVEETVSSQKSSSGSIKTTQKKTEPVVLKDISLSSDERQSCGISELD
RVLGGGIVPGSLVLVGGDPGIGKSTLLLQVCRNLSSQGVSVLYISGEESLRQIKLRADRLGTFNDKLKLLCETNLENIRE
IIERTKPDVAVVDSIQTMFHEDISSAPGSVSQVRESTNVLMQIAKGMGVSIFIVGHVTKEGNVAGPRVLEHMVDTVLYFE
GDRHASYRILRAVKNRFGSTNEIGVFEMQNSGLEEVKNPSEFLLNGRPENASGSVAACSMEGTRPILVEIQALVCQSNFG
IPRRTAVGTDFNRVNLLMAVLEKKAGVHLAASDAYVNIAGGMKMTEPAIDLGICLAIISSAKEIVIPDSVMAFGEIGLSG
EVRAVSMAGQRVQEAKKLGFETVILPKVNRTATERIKGIKLVYVAGIRDAISFIRGL

Nucleotide

• Length: 1374 bp

>NTDB_id=364930 EYS05_RS17295 WP_118626403.1 3723997..3725370(-) (radA) [Blautia sp. SC05B48]
ATGCTAAAAAATAAAAAAACGGTTTATTTCTGTCAGGAATGCGGGTATGAATCAGCCAAGTGGATGGGACAGTGCCCGGC
ATGTAAGGCATGGAATACTTTTGTGGAGGAAACGGTTTCTTCCCAAAAATCTTCCTCGGGGAGTATTAAAACTACACAAA
AGAAAACGGAGCCTGTAGTTCTGAAAGATATCAGTCTTTCTTCAGATGAACGTCAGAGTTGCGGAATCAGTGAACTTGAC
AGGGTGCTGGGAGGCGGAATCGTCCCCGGCTCCCTTGTTTTGGTAGGTGGAGATCCTGGTATTGGCAAGTCTACATTGTT
GTTGCAGGTGTGCAGAAATTTATCTTCACAGGGGGTTTCTGTTTTATACATTTCTGGTGAGGAGTCTCTCAGACAGATCA
AGCTCCGGGCAGATCGTCTTGGAACGTTTAATGATAAACTGAAACTGCTCTGTGAGACGAATCTCGAAAATATCCGAGAG
ATCATTGAGCGGACGAAGCCAGATGTAGCTGTTGTGGATTCTATCCAGACGATGTTTCATGAAGATATTTCGTCTGCACC
GGGAAGCGTTTCTCAGGTGAGGGAATCTACCAATGTACTGATGCAGATCGCTAAGGGTATGGGTGTGTCCATTTTTATCG
TGGGTCATGTGACTAAGGAGGGAAATGTGGCAGGTCCTCGTGTACTGGAGCATATGGTAGATACTGTGCTTTACTTTGAG
GGGGACAGGCATGCGTCTTACCGGATCTTGCGTGCGGTGAAAAATCGTTTTGGTTCTACCAATGAAATTGGTGTTTTTGA
GATGCAGAATTCCGGACTTGAAGAAGTGAAGAATCCTTCCGAGTTCCTTTTGAATGGAAGACCGGAGAATGCTTCGGGAT
CTGTTGCTGCATGTTCTATGGAGGGGACGAGACCGATTTTGGTGGAGATTCAGGCTCTGGTGTGTCAGAGTAATTTTGGA
ATTCCGAGAAGAACAGCAGTTGGTACGGATTTTAATCGTGTGAATCTTTTGATGGCGGTTCTGGAGAAGAAGGCGGGAGT
TCATCTTGCTGCTTCAGATGCTTATGTGAATATTGCGGGTGGTATGAAAATGACAGAGCCGGCAATTGACCTGGGTATTT
GCCTTGCTATTATTTCCAGTGCGAAGGAGATCGTGATCCCGGATTCGGTGATGGCGTTTGGTGAAATTGGTCTGAGTGGC
GAGGTTCGTGCAGTGAGTATGGCCGGACAGCGTGTGCAGGAAGCGAAAAAGCTTGGGTTTGAGACGGTGATACTTCCTAA
GGTGAACCGGACGGCTACAGAGAGGATTAAAGGAATTAAATTGGTTTATGTGGCTGGAATCAGGGATGCGATTTCTTTTA
TCAGAGGGTTGTGA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

• AAA domain (AAA_25) (68-221)

• Subunit ChlI of Mg-chelatase (ChlI) (343-429)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	57.018	99.781	0.569
radA	Streptococcus pneumoniae Rx1	53.111	98.468	0.523
radA	Streptococcus pneumoniae D39	53.111	98.468	0.523
radA	Streptococcus pneumoniae R6	53.111	98.468	0.523
radA	Streptococcus pneumoniae TIGR4	53.111	98.468	0.523
radA	Streptococcus mitis NCTC 12261	53.111	98.468	0.523
radA	Streptococcus mitis SK321	52.889	98.468	0.521