Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   BCPR1_RS21260 Genome accession   NZ_CP040515
Coordinates   4084700..4086526 (-) Length   608 a.a.
NCBI ID   WP_000003388.1    Uniprot ID   A0AAJ1NDU8
Organism   Bacillus paranthracis strain PR1     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 4079700..4091526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCPR1_RS21230 (BCPR1_21230) - 4080127..4080924 (-) 798 WP_000673184.1 NAD kinase -
  BCPR1_RS21235 (BCPR1_21235) - 4080943..4081581 (-) 639 WP_001081482.1 GTP pyrophosphokinase family protein -
  BCPR1_RS21240 (BCPR1_21240) - 4081612..4081983 (-) 372 WP_001180003.1 hypothetical protein -
  BCPR1_RS21245 (BCPR1_21245) - 4082130..4082708 (+) 579 WP_000191107.1 CYTH domain-containing protein -
  BCPR1_RS21250 (BCPR1_21250) - 4082889..4083287 (+) 399 WP_000043380.1 hypothetical protein -
  BCPR1_RS21255 (BCPR1_21255) - 4083287..4084180 (+) 894 WP_000360653.1 ClpXP adapter SpxH family protein -
  BCPR1_RS27810 - 4084410..4084583 (+) 174 WP_041184086.1 hypothetical protein -
  BCPR1_RS21260 (BCPR1_21260) pepF 4084700..4086526 (-) 1827 WP_000003388.1 oligoendopeptidase F Regulator
  BCPR1_RS21265 (BCPR1_21265) - 4086577..4087821 (-) 1245 WP_138322319.1 competence protein CoiA family protein -
  BCPR1_RS21270 (BCPR1_21270) - 4087902..4089446 (-) 1545 WP_000799204.1 cardiolipin synthase -
  BCPR1_RS21275 (BCPR1_21275) mecA 4089519..4090202 (-) 684 WP_000350710.1 adaptor protein MecA Regulator
  BCPR1_RS21280 (BCPR1_21280) - 4090542..4091216 (+) 675 WP_000362601.1 TerC family protein -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70337.69 Da        Isoelectric Point: 4.6950

>NTDB_id=364879 BCPR1_RS21260 WP_000003388.1 4084700..4086526(-) (pepF) [Bacillus paranthracis strain PR1]
MSEQNTAKTLPDRKEIEESSTWRLEDIFQTDAEWEKEFQAIKELLPKLTEFKGKLGDSANNLLEALQYEDEISMRLGKLY
TYAHMRYDQDTTNSVYQALNDRATNLYSQVSSSTAYIVPEILSISEDTLQTFLKENRDLSVYEHALEEITRQRPHVLSEA
EEALLAEASEVMSASSNTFGMLNNADLKFPSIKGEDGEEVEITHGRYIQFLESDDRRVREDAFKAVYETYGKYKNTFAST
LSGAVKRNNFNARVRKYDSARQAALSNNNIPEAVYDQLVQSVNDNLHLLHRYIDIRKRALGLDELHMYDLYTPLVPEVKM
NVKYEEAQDMLLKSLHVLGDEYVDILKEAYENRWVDVYENKGKRSGAYSSGAYGTNPYILMNWHDNVNNLFTLAHEFGHS
VHSYYTRKTQPHVYGDYSIFVAEVASTCNEALLNDYLLKTTEDKKERLYLLNHYLEGFRGTVFRQTMFAEFEHMIHKKVQ
EGHAVTPDMLTEIYYDLNKKYFGDSLVIDEEIGLEWSRIPHFYYNYYVYQYATGFSAATALSKQILEEGQPAVERYINEF
LKAGSSDYPIEVLKKAGVDMASPEPVKEALQVFEEKLNELEALLFEEK

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=364879 BCPR1_RS21260 WP_000003388.1 4084700..4086526(-) (pepF) [Bacillus paranthracis strain PR1]
ATGTCTGAACAAAACACAGCAAAAACATTACCAGATCGCAAAGAAATTGAAGAATCAAGTACGTGGCGGTTAGAAGATAT
TTTCCAAACAGATGCAGAATGGGAAAAAGAATTCCAAGCCATTAAAGAGCTATTACCGAAGTTAACTGAATTTAAAGGGA
AACTGGGTGACTCTGCGAACAATTTACTGGAAGCATTGCAATATGAAGATGAAATTTCAATGCGATTAGGTAAGCTATAT
ACATATGCACATATGCGTTACGATCAAGATACAACAAACTCTGTGTATCAAGCGTTAAATGACCGCGCGACAAATTTATA
TTCACAAGTATCTAGTAGCACAGCATATATTGTGCCTGAAATTTTATCGATTTCAGAAGATACACTGCAAACATTCTTGA
AAGAAAATAGAGACTTAAGTGTATATGAGCATGCGTTAGAAGAAATTACGCGTCAACGCCCTCACGTATTATCTGAAGCG
GAAGAGGCTCTATTAGCAGAAGCATCTGAAGTAATGAGTGCGTCAAGTAATACATTTGGTATGTTGAATAATGCGGATTT
GAAATTCCCATCTATTAAAGGTGAGGATGGAGAAGAAGTAGAAATTACACATGGTCGTTACATTCAGTTTTTAGAAAGTG
ATGATCGTCGTGTGCGTGAAGATGCATTCAAAGCTGTATATGAAACGTACGGAAAATATAAGAACACATTTGCAAGTACG
TTAAGCGGAGCTGTAAAGCGTAATAATTTCAATGCACGTGTTCGTAAATATGACTCTGCACGTCAAGCAGCATTAAGTAA
TAATAATATTCCTGAAGCGGTGTATGATCAACTTGTTCAATCTGTAAATGACAATTTACACTTGCTACATCGATACATTG
ATATTCGTAAGCGTGCGCTAGGGCTTGATGAGCTTCATATGTATGATTTATATACACCACTTGTACCAGAAGTGAAAATG
AATGTGAAGTATGAAGAAGCGCAAGACATGTTATTAAAGTCTTTACATGTACTTGGTGATGAGTATGTTGACATTTTAAA
AGAAGCATATGAAAATCGCTGGGTAGATGTGTATGAGAATAAAGGAAAAAGAAGCGGAGCATATTCATCTGGTGCATATG
GAACAAATCCGTATATTTTAATGAACTGGCATGATAATGTAAATAATTTATTTACACTTGCTCATGAGTTTGGTCATTCG
GTGCATAGTTACTACACAAGAAAAACGCAGCCGCACGTATACGGTGACTATTCAATCTTCGTTGCAGAAGTAGCATCAAC
TTGTAATGAAGCGCTTCTAAACGATTATTTATTAAAAACGACAGAAGATAAGAAAGAGCGTCTATACTTATTAAATCATT
ATTTAGAAGGATTCCGTGGTACTGTATTCCGTCAAACGATGTTCGCAGAGTTTGAGCATATGATTCATAAGAAAGTACAA
GAGGGACATGCGGTTACGCCAGACATGTTAACGGAGATTTACTATGATTTAAATAAGAAATATTTCGGTGATTCTTTAGT
AATTGATGAAGAAATTGGTTTAGAGTGGTCTCGTATTCCGCACTTCTACTACAACTATTACGTATATCAATACGCAACAG
GATTTAGTGCAGCGACGGCTCTATCTAAACAAATTTTAGAAGAAGGGCAACCAGCAGTAGAACGTTACATTAATGAGTTC
TTAAAAGCAGGAAGCTCAGATTACCCAATTGAAGTGCTGAAAAAAGCTGGAGTAGATATGGCATCTCCAGAACCAGTAAA
AGAAGCATTGCAAGTATTTGAAGAGAAATTAAATGAATTAGAAGCATTATTATTTGAAGAGAAGTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-591)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.084

97.533

0.488

Multiple sequence alignment