Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   BCPR1_RS07835 Genome accession   NZ_CP040515
Coordinates   1474022..1474456 (+) Length   144 a.a.
NCBI ID   WP_000811499.1    Uniprot ID   A0A1J9ZQC5
Organism   Bacillus paranthracis strain PR1     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1469022..1479456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCPR1_RS07815 (BCPR1_07815) - 1469917..1471074 (-) 1158 WP_000434566.1 aminotransferase A -
  BCPR1_RS07820 (BCPR1_07820) - 1471198..1471398 (-) 201 WP_000929285.1 hypothetical protein -
  BCPR1_RS07825 (BCPR1_07825) kinB 1471708..1472982 (+) 1275 WP_000420387.1 sporulation sensor histidine kinase KinB -
  BCPR1_RS07830 (BCPR1_07830) - 1473036..1473785 (-) 750 WP_000388462.1 DUF3967 domain-containing protein -
  BCPR1_RS07835 (BCPR1_07835) nucA/comI 1474022..1474456 (+) 435 WP_000811499.1 DNA-entry nuclease Machinery gene
  BCPR1_RS07840 (BCPR1_07840) comJ 1474492..1474881 (+) 390 WP_000424015.1 competence protein ComJ -
  BCPR1_RS07845 (BCPR1_07845) metE 1474920..1477208 (-) 2289 WP_138321188.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  BCPR1_RS07850 (BCPR1_07850) - 1477888..1478451 (-) 564 WP_000062057.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 15996.35 Da        Isoelectric Point: 8.4331

>NTDB_id=364867 BCPR1_RS07835 WP_000811499.1 1474022..1474456(+) (nucA/comI) [Bacillus paranthracis strain PR1]
MKQLKGIIISIIAILSIVVAVYEVLVPEETSIKKTNAYDQVLEFPKDRYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=364867 BCPR1_RS07835 WP_000811499.1 1474022..1474456(+) (nucA/comI) [Bacillus paranthracis strain PR1]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTGTAGTAGCGGTGTATGAAGTGCTTGTTCC
AGAGGAAACAAGTATTAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGATCGATATCCAGAGACAGGGA
AACATATTACGGATGCTATAAAAGAAGGACATTCAGAAGTGTGTACAATCGACCGTGGTGGCGCTGCGGATAGAAGAAAA
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCAGCCGATAACCGCGGAGCAGGCTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(49-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9ZQC5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

72.072

77.083

0.556

Multiple sequence alignment