Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | CJS3_RS03125 | Genome accession | NC_017281 |
| Coordinates | 596114..596497 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni subsp. jejuni S3 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 591114..601497
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJS3_RS03105 (CJS3_0621) | - | 591193..593127 (-) | 1935 | WP_002867720.1 | ribonuclease R family protein | - |
| CJS3_RS03110 (CJS3_0622) | ilvC | 593246..594268 (+) | 1023 | WP_002852218.1 | ketol-acid reductoisomerase | - |
| CJS3_RS03115 (CJS3_0623) | - | 594272..595354 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| CJS3_RS03120 (CJS3_0624) | dprA | 595344..596117 (+) | 774 | WP_002867721.1 | DNA-processing protein DprA | Machinery gene |
| CJS3_RS03125 (CJS3_0625) | dprB | 596114..596497 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| CJS3_RS03130 (CJS3_0626) | - | 596526..597365 (+) | 840 | WP_011049748.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| CJS3_RS03135 (CJS3_0627) | msrA | 597541..598038 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| CJS3_RS03140 (CJS3_0628) | ppa | 598080..598598 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| CJS3_RS03145 (CJS3_0629) | adk | 598608..599186 (-) | 579 | WP_011049749.1 | adenylate kinase | - |
| CJS3_RS03150 (CJS3_0630) | aspS | 599183..600934 (-) | 1752 | WP_011049750.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=36486 CJS3_RS03125 WP_002852281.1 596114..596497(+) (dprB) [Campylobacter jejuni subsp. jejuni S3]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=36486 CJS3_RS03125 WP_002852281.1 596114..596497(+) (dprB) [Campylobacter jejuni subsp. jejuni S3]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |