Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BPGQ101_RS11670 Genome accession   NZ_CP040514
Coordinates   2261329..2262132 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain GQYP101     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2256329..2267132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BPGQ101_RS11655 (BPGQ101_11660) - 2258545..2258781 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  BPGQ101_RS11660 (BPGQ101_11665) - 2258815..2259552 (-) 738 WP_024718886.1 glycerophosphodiester phosphodiesterase -
  BPGQ101_RS11665 (BPGQ101_11670) - 2259779..2260879 (-) 1101 WP_024718885.1 Rap family tetratricopeptide repeat protein -
  BPGQ101_RS11670 (BPGQ101_11675) spo0A 2261329..2262132 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  BPGQ101_RS11675 (BPGQ101_11680) spoIVB 2262416..2263693 (-) 1278 WP_007501161.1 SpoIVB peptidase -
  BPGQ101_RS11680 (BPGQ101_11685) recN 2263892..2265625 (-) 1734 WP_058336661.1 DNA repair protein RecN Machinery gene
  BPGQ101_RS11685 (BPGQ101_11690) ahrC 2265660..2266109 (-) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  BPGQ101_RS11690 (BPGQ101_11695) - 2266270..2267124 (-) 855 WP_007501164.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=364819 BPGQ101_RS11670 WP_008342226.1 2261329..2262132(-) (spo0A) [Bacillus altitudinis strain GQYP101]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=364819 BPGQ101_RS11670 WP_008342226.1 2261329..2262132(-) (spo0A) [Bacillus altitudinis strain GQYP101]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACAAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment