Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BPGQ101_RS05695 Genome accession   NZ_CP040514
Coordinates   1102097..1103047 (+) Length   316 a.a.
NCBI ID   WP_039167438.1    Uniprot ID   -
Organism   Bacillus altitudinis strain GQYP101     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1097097..1108047
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BPGQ101_RS05680 (BPGQ101_05685) - 1098849..1100288 (-) 1440 WP_208755864.1 PLP-dependent aminotransferase family protein -
  BPGQ101_RS05685 (BPGQ101_05690) - 1100431..1101600 (+) 1170 WP_058337508.1 MFS transporter -
  BPGQ101_RS05690 (BPGQ101_05695) - 1101663..1101941 (+) 279 WP_039167440.1 barstar family protein -
  BPGQ101_RS05695 (BPGQ101_05700) ceuB 1102097..1103047 (+) 951 WP_039167438.1 ABC transporter permease Machinery gene
  BPGQ101_RS05700 (BPGQ101_05705) - 1103040..1103990 (+) 951 WP_045034717.1 iron chelate uptake ABC transporter family permease subunit -
  BPGQ101_RS05705 (BPGQ101_05710) - 1103981..1104739 (+) 759 WP_019743341.1 ABC transporter ATP-binding protein -
  BPGQ101_RS05710 (BPGQ101_05715) - 1104762..1105706 (+) 945 WP_138278364.1 siderophore ABC transporter substrate-binding protein -
  BPGQ101_RS05715 (BPGQ101_05720) - 1105845..1106801 (+) 957 WP_008348636.1 LCP family protein -
  BPGQ101_RS05725 (BPGQ101_05730) - 1107035..1107469 (-) 435 WP_039167431.1 hypothetical protein -
  BPGQ101_RS05730 (BPGQ101_05735) - 1107555..1107917 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34959.31 Da        Isoelectric Point: 9.7475

>NTDB_id=364798 BPGQ101_RS05695 WP_039167438.1 1102097..1103047(+) (ceuB) [Bacillus altitudinis strain GQYP101]
MKLYQLSLLFLCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=364798 BPGQ101_RS05695 WP_039167438.1 1102097..1103047(+) (ceuB) [Bacillus altitudinis strain GQYP101]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTTTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTAATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATTATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment